Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0078 ATGGCTATTGCTGGTCTGCACAATGTATCTGTACTCGAGTCTTCTTTCCTGAGGGATTCCCATTCCCAGTCATCCAGCAGGCGGGGAGATGGAAGGAGGGGAGGAACCCGGTCATCCGCACTCTTGCAAATGTGGCGAGAGCTTGAAGATGAACATGCGGTGAATCAGGTGCAAGGAAGGCCTGGTGAAGTACTACTTGAACAAAGGAGTGATGGGTTGATTTCTGACCTCTCACAGGCAGATTCTCCAGGTAGCCATGAGAGAGGACAGGATCGAATGCTAGAGGACGCAGTTTTGGGCGACACTGAATCTGAAACATGGTCACAGTCACAAAGTCAGAATGAATCCCATTACGATCATGAGGATTTAAACAACTCCAGCTGTGAAAACTCCTCTGATTTGGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTTAGGGAATGGATGAGCAGTGGTGCTGGGGATCATGGATCAAACATTTCCCGGAGAAATAACAGTTCAAGGGGAGAATGGCTTGGTGAAACTGAGCAGGAAAGGGTGAGAATAATAAGGGAGTGGGTACAAATGAGTAGCCAGCACAGAGGTGTTTCTTCTGGGGAAACCAGGGAAGAGCAATCTGCTGAAATTGGTACACAAATTGAACGTGTTCGTGATGGCTTTGTTGTTAACCAGGGCGAGGGCCAGACTGAACATTTTCGTAGGGGAATCCGTAAATTATGCGGACGACAGGTTATGCTTGATATGCTGAAGAAGGCTGAGATGCAAAGGCAAAGAGAAATTCAAGAGTTGTTGAACCATCGGGCAGTATCTCATTTCCCCCATCGTAATCGCATTCAGGCATTGCTTAGAGGCTGGTTCTTGAGAAATGATAGATCTGTTGATAATAACAGGTCCACTTCTGTCGCTGAAAGTGAACTAGGTTTATTGAGGCAAAGACAAACTGTATCAGAACTAAGGGAAGGATTCTTCTCTAGGAAGGATAAAACTGGTTGCAGTCAAGCAACTGGCAACGTATCTGATATGTCACCTAACAGTGATATTGAATTTAATACGATTGAACAAACTGGTGCTAGCAATTCACATGTGGTCCCCACTGTGAATTCTGAACGGTCTGAATCTAATACCAGAAGAAATGATGGAGTTGAGATGTTGGGAGGCCAGAATTGTTTGCAGGAAACAATGTCTGACAATCCAGATCAACAAGACACTACTGGTCGTGTAGAAGGAGCTCAGTTACAGGTGCAATTTGAACCAGTAAATCAGCTATCATCCAGTGTGGCCGCTGAAAGAAGAGATAGCACTGGGCAAAATGTTGATGTGAACCGTGTGATGCCAGTTGAGGATACTGCTAGTGATCATGTGCAGCAAAGTTTGCAAACTGAAGATCCATTTCAGAGTGCTATGCCGGAATTCAGTGAGGCATACAATGATCGACTTCGATCGGGTGATATAAGTAATGGTGTAAATGACTCATCAAACCACAACCACCCAATGGAGGAAAATATTGTTGATATGAATCGGAATGAATCCGCTTCTCTGGTAGGAGAACAGCTGGAAGAAGATATTGAAAATGAAGGAAGTGTCTGGAATCAGAGTAACCGTGAATGGAGAAATAGCACCGAGGAAGGTGTAGATGATAATCAAGTCAGCAGTACATCAATGCAGTGGCCTGAAAATGAATTTGGAAATGAGGATGGAGAAAACTCTCGGCTGCAAGAAGGTCCTGAAGTCTGGCAAGAGGATGGTGGCTTCCAAGAGGCTGTAGAAAATTGGTTGGGGGCTCCTTCTGATCTTGAAAGTGCTCCAGTCGGTAGGATTCATGGATTTTACTTTCCAGATGACGACAATGTATATAGTGTTGAACTCAGAGAACTGCTTAATAGGAGAAGTGTCTCCAACCTCCTCCGTAGCAGTTTCCGCGATAGTCTTGACCAGTTGATACAATCATATGTTGTAAGACAAGGCCATAATCAGATGGAGTGGGAGCTACAAGAAACAACCCCGTCTTCTGCCTCTGTGGAACAGGACCTTGAACAGCAGAGTAGGGATCAGATTGTTGGTCAGGAGGGTACTGTTAATAGTCCACATGACCTACCTTCTTTACCTATTCCTCCTCCTTTGCCTCTTTGGGACCGGCACCCTCGCCGTGACAGCTGGTCACAGTCACAGAGTGACATGAATAATCAGCATCTAGGAGGAATTGATTGGGAGGTTGTCAATGACTTGAGAATTGACATGTCTAGGCTGCAGCAAAGGATGAACAATATGCAAAGAATGCTGGAGGCTTGTATGGATATGCAGCTGGAGTTGCAGCGTTCAATAAGGCAAGAAGTTTCTGCTGCCCTAAATCGTTCGACTGGTTCATCAGGAACAAATGAGTTCGAGTCATCAGATGAATCCAAATGGGAATGTGTGAGGAAAGGGCTTTGCTGTATATGCTGTGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGGCACTTGTGTACATGTTCTAAATGTGCCAATGAGTTGCTTCAAAGTAAAAGGAAGTGCCCGATGTGTCAAGCCCCCGTGGTGGAGGTTATACGTGCTTATTCTATACTATAG 2592 0.4495 MAIAGLHNVSVLESSFLRDSHSQSSSRRGDGRRGGTRSSALLQMWRELEDEHAVNQVQGRPGEVLLEQRSDGLISDLSQADSPGSHERGQDRMLEDAVLGDTESETWSQSQSQNESHYDHEDLNNSSCENSSDLGEVERERVRQIFREWMSSGAGDHGSNISRRNNSSRGEWLGETEQERVRIIREWVQMSSQHRGVSSGETREEQSAEIGTQIERVRDGFVVNQGEGQTEHFRRGIRKLCGRQVMLDMLKKAEMQRQREIQELLNHRAVSHFPHRNRIQALLRGWFLRNDRSVDNNRSTSVAESELGLLRQRQTVSELREGFFSRKDKTGCSQATGNVSDMSPNSDIEFNTIEQTGASNSHVVPTVNSERSESNTRRNDGVEMLGGQNCLQETMSDNPDQQDTTGRVEGAQLQVQFEPVNQLSSSVAAERRDSTGQNVDVNRVMPVEDTASDHVQQSLQTEDPFQSAMPEFSEAYNDRLRSGDISNGVNDSSNHNHPMEENIVDMNRNESASLVGEQLEEDIENEGSVWNQSNREWRNSTEEGVDDNQVSSTSMQWPENEFGNEDGENSRLQEGPEVWQEDGGFQEAVENWLGAPSDLESAPVGRIHGFYFPDDDNVYSVELRELLNRRSVSNLLRSSFRDSLDQLIQSYVVRQGHNQMEWELQETTPSSASVEQDLEQQSRDQIVGQEGTVNSPHDLPSLPIPPPLPLWDRHPRRDSWSQSQSDMNNQHLGGIDWEVVNDLRIDMSRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGTNEFESSDESKWECVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSKRKCPMCQAPVVEVIRAYSIL* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0078 863 SUPERFAMILY RING/U-box 810 856 - -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 16 37 - -
Ahy3g0078 863 Coils Coil 740 767 - -
Ahy3g0078 863 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 787 861 IPR013083 -
Ahy3g0078 863 ProSiteProfiles Zinc finger RING-type profile. 811 850 IPR001841 -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 539 571 - -
Ahy3g0078 863 CDD mRING-HC-C3HC5_NEU1 811 849 - -
Ahy3g0078 863 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 862 - -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 100 137 - -
Ahy3g0078 863 Pfam Zinc finger, C3HC4 type (RING finger) 808 855 - -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 155 172 - -
Ahy3g0078 863 PANTHER PROTEIN, PUTATIVE-RELATED 1 862 - -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 539 560 - -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 149 175 - -
Ahy3g0078 863 MobiDBLite consensus disorder prediction 359 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0078 Ahy-Chr3 718716 723734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0078 811 857 C3H Transcription Factor Family AT3G06140 42.553 1.33e-06 49.7