Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0072 ATGTCCCATCGTAACAAACCTTCTCCATCTGATTCCGCCGCCGGAAGAGGCCGCGGCCGTGGTCGTGGACCTGGTCCGGCGCAATCCGTTCCTGCTGTTCGTCCGTCAGTGCCATTTGCACCTCCTGCTGCGCCGGGACCGGCGATCGGTTCGTCCACCTCGACTCCTCCTCTCGCTGCTGTTGCTTCTGCTTCCTCGTCGAGCTCGATGGCGCCAGAGGCGGTGACTGCCGGCGTTGAGAAGCTCGCATTGCAGCAGGCGGCGCCGCTGTCGTCGTCGAAGGCACTGCGGATTCCGAGACGGCCAGGTTTTGGAACACTTGGACAGAAGATTCAGGTTCGCGCGAACCACTTCCTGGTTCAAGTTGCTGATCGTGATCTCCACCACTACGACGTTGCTATCACTCCTGAGGTAACTGCTAAGAGCATTAGAAGAATTCTGGTGAACCTACTGGTGACGAAGTATCTTAAGACGAACCTCGGGAATCGCATTCCAGCTTTTGACGGTAATAAGAACCTCTACACTGCTGGACGGCTACCGTTTGAGTCGCAGGACTTCGTCATCAAGCTTTCCGATGATGATCGCAAAGGTTCTTCTGCTGCTTCTGCTTCTGCTTCTGGTTCGGCCAGCAAAAAACGCGAAAGGGAGTTTAAAATTACGATCCGATTTGCTGCGAAGGTGGAACTTCAGAATCTTATCCAGTTCCTTAGATGCCAGCAGCGGGAAACTCCACAAGATACCATACAAGCTCTTGATGTTGCCTTGCGTGCGTTGCCATCCGAAAAGTATAATATTTCGGGGAGATCGTTTTTTTCGCCATTGCTGGGGCAACAAGGGTCGCTTGGTGGTGGGATAGAATACTGGAGGGGTTATTATCAAAGTCTTCGCCCCACTCAGATGGGACTTTCGCTTAATATTGATGTGTCAGCAAGGTCCTACTATGAACCAATTCTTGTTACTGACTTTGTTGAGAAACACTTTAATCTTGACTTGTCTAGGCGTCTGTCTGACCAAGATCGTGTTAAGATTAAGAAAGCTTTAAGAGGGATCAAGGTAGAAGTTCGCAACAATGAGAATATTAGAGGCTACAAGGTTACTGGAATCTCAAAGGAGCCCTTATATGAGTTAATGTTCACTCTTGATGACAATGCAACAAAAAAATCAGTTGTTCAATACTTTCATGAGAAATATGGTATTCAATTGAGATATCTGAATCTTCCTGCTATCCAAGCTGGAAGTGATGCAAAACCTGCCTATTTGCCTATGGAGGTTTGTTCGATTGCTTCTGGACAGAGGTATACCAAGAGATTAACTGAGACTCAGGTAACTGCACTTCTGAAGGCAAATTGTCAGCGTCCTCAAGAAAGGGAAAACTACATCAAACAGATTGCCAGGCAGAACAATTTTAACAATGACAAATATGCTCGGGAATTTGGGATTAGTGTAGCGGCGGATCTGCCATTGGTTGATGCTCGAGTCTTGCAACCTCCAATGCTGAAATATCATGACAGTGGAAAAGAAAAAATGGTTAACCCACAGATGGGTGCATGGAATATGATTAATAAGAAAATGTATGGTGGTGGGACAGTGCAACACTGGACTTGTATCAATTTTTCTAGAAGAGTGAACAGAGATGTGCCATCTCAGTTTTGTGCTGAATTGATCAGCATGTGTGTTAGTAAGGGAATGATTTTCAAGAGAGAGCCTCTAATTCCTATAATTTCAGCACAACCCAATGCAATAGAGAGAGCTCTTGCTGAACTTCATGATAAGTGTAAGAAGACGGGGAAGAACCTTGACCTTTTGATAATAATTTTACCCGACTCAAAGGGGTCTTATGGAACAATAAAGCGGAAATGTGAAACAGAACTAGGAATAGTGTCTCAGTGCTGTCTACCAAATCATGCTTATCAGATGAAGAAGCAGTATCTTGAAAATGTTTCTCTCAAGATAAATGTCAAGGTTGGTGGAAAAAACCTGGTGTTACGTGATGCAGATCTCCATAACATTCCCTTTTTATCTGATATGCCAACTTTAATCTTAGGAGCTGATGTAACACATCCACAACCAGGGGAAGACTCAGCTCCCTCTATTGCTGCAGTTGTGGGATCCATAGATTGGCCTCTGGTCACACAGTACAGAGCAATTGTTTCTGCCCAGATGCACCGTCAAGAAATCATTCAGGATCTTTATAAAACTACTGTGGTTCCGAATAAGGGAATTGTGCCTGGTGGAATGATCAGGGAGCTGCTCATGGCCTTTTACAAAAAAACAAATCGGAAGCCTGACAGGATTATATTCTACAGAGATGGAGTCAGTGAGGGACAGTTCAGTCAAGTTTTGCTTCATGAGATGGATGCAATAAGACAGGCTTGCGCCTCCTTGCAAGCAGGTTATCAGCCCCGAGTTACATTTGTCGTCGTTCAGAAACGACATCACACTCGCTTCTTCCCTGCTGATCACAGAAGACGGGATCAAACTGACAAAAGTGGAAATATACTGCCAGGTACTGTTGTGGACACCAAAATTTGCCACCCTTGGGAGCACGATTTTTACCTCAACAGTCATGCTGGAATTCAAGGAACCAGTCGACCTACTCATTATCATATGCTGTTTGATGAAAACAACTTCACTGCTGATGGATTCCAGACTTTGACTAATAACTTATGTTACACGTATGCCAGGTGCACTCGTTCAGTATCAATAGTTCCTCCTGCATATTATGCGCACTTAGCTGCTTTTCGAGCTCGCTACTACATCGAAGGTGAAATGTCAGAAGGGGATTCTGCGAGTAGGGGCGGCGGCGGTAGAGTGATGTTAGACTTGCCTGCAGTCAAGGACAATGTCAAGGAAGTCATGTTTTATTGCTGA 2871 0.4552 MSHRNKPSPSDSAAGRGRGRGRGPGPAQSVPAVRPSVPFAPPAAPGPAIGSSTSTPPLAAVASASSSSSMAPEAVTAGVEKLALQQAAPLSSSKALRIPRRPGFGTLGQKIQVRANHFLVQVADRDLHHYDVAITPEVTAKSIRRILVNLLVTKYLKTNLGNRIPAFDGNKNLYTAGRLPFESQDFVIKLSDDDRKGSSAASASASGSASKKREREFKITIRFAAKVELQNLIQFLRCQQRETPQDTIQALDVALRALPSEKYNISGRSFFSPLLGQQGSLGGGIEYWRGYYQSLRPTQMGLSLNIDVSARSYYEPILVTDFVEKHFNLDLSRRLSDQDRVKIKKALRGIKVEVRNNENIRGYKVTGISKEPLYELMFTLDDNATKKSVVQYFHEKYGIQLRYLNLPAIQAGSDAKPAYLPMEVCSIASGQRYTKRLTETQVTALLKANCQRPQERENYIKQIARQNNFNNDKYAREFGISVAADLPLVDARVLQPPMLKYHDSGKEKMVNPQMGAWNMINKKMYGGGTVQHWTCINFSRRVNRDVPSQFCAELISMCVSKGMIFKREPLIPIISAQPNAIERALAELHDKCKKTGKNLDLLIIILPDSKGSYGTIKRKCETELGIVSQCCLPNHAYQMKKQYLENVSLKINVKVGGKNLVLRDADLHNIPFLSDMPTLILGADVTHPQPGEDSAPSIAAVVGSIDWPLVTQYRAIVSAQMHRQEIIQDLYKTTVVPNKGIVPGGMIRELLMAFYKKTNRKPDRIIFYRDGVSEGQFSQVLLHEMDAIRQACASLQAGYQPRVTFVVVQKRHHTRFFPADHRRRDQTDKSGNILPGTVVDTKICHPWEHDFYLNSHAGIQGTSRPTHYHMLFDENNFTADGFQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEMSEGDSASRGGGGRVMLDLPAVKDNVKEVMFYC* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0072 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 940 - -
Ahy3g0072 956 Gene3D - 670 956 IPR036397 GO:0003676
Ahy3g0072 956 Gene3D paz domain 312 434 - -
Ahy3g0072 956 MobiDBLite consensus disorder prediction 1 52 - -
Ahy3g0072 956 Pfam Piwi domain 602 920 IPR003165 GO:0003676
Ahy3g0072 956 SMART DUF1785_2 264 316 IPR014811 -
Ahy3g0072 956 Pfam PAZ domain 326 444 IPR003100 GO:0005515
Ahy3g0072 956 CDD Piwi_ago-like 473 920 IPR045246 -
Ahy3g0072 956 ProSiteProfiles PAZ domain profile. 317 429 IPR003100 GO:0005515
Ahy3g0072 956 CDD PAZ_argonaute_like 319 428 - -
Ahy3g0072 956 Pfam Mid domain of argonaute 511 589 IPR032473 -
Ahy3g0072 956 SUPERFAMILY PAZ domain 110 470 IPR036085 GO:0005515
Ahy3g0072 956 SUPERFAMILY Ribonuclease H-like 596 921 IPR012337 -
Ahy3g0072 956 SMART PAZ_2_a_3 326 445 IPR003100 GO:0005515
Ahy3g0072 956 SMART Piwi_a_2 601 921 IPR003165 GO:0003676
Ahy3g0072 956 Pfam Argonaute linker 1 domain 267 314 IPR014811 -
Ahy3g0072 956 Pfam N-terminal domain of argonaute 109 255 IPR032474 -
Ahy3g0072 956 Pfam Argonaute linker 2 domain 455 501 IPR032472 -
Ahy3g0072 956 Gene3D - 493 663 - -
Ahy3g0072 956 ProSiteProfiles Piwi domain profile. 601 921 IPR003165 GO:0003676
Ahy3g0072 956 PANTHER PROTEIN ARGONAUTE 1A 32 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0072 Ahy-Chr3 654438 660153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0072 18 956 Eukaryotic Initiation Factors Gene Family AT1G48410 54.822 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0072 K11593 - gmx:100799033 1189.1