Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0044 ATGAGGACAGTGTACAGCAAGGATGGGAATCTCACAAATTTACGGTTTTGCCACTGTTCCCAAGTTCGCACCCTTACCCCAAAATCCTCATTCCTCGTTTCTCTCATTCAAGTTCCAAACTTTACCCTCTCCATCACAACAAAAACCTTTCCCTTTCGATCTTCCTCCATTCTCTGCGGAATCAACCGTCGATGTGTGAATAATAATTATCGTCGTTGGGTGATTCGAGCATCAATGGCATCTTCCACGTCATCCCCAACACAGAGAGAGCGATTCTCTGTGCTGTTTGTGTGCCTCGGCAACATATGCAGAAGCCCAGCTGCGGAAGGAGTATTCCAGGACTTGGTTAAGAAAAGGGGTCTCGATTCAAAGTTCAACATCGATTCTTGTGGCACCATCGATTATCACGAGGGGAATGAAGCGGATCCGAGAATGAGGGAAGCATCAAAGAAGCGTGGGATTCAGATAACTTCAATTTCGAGGCCGATCAAGCCATCTGATTTCGTTGATTTTGATCTTATTCTAGCTATGGACATGCAAAACAGAGAGGACATATTGGAGTCTTTCAATAGTTGGAGAGCCAGATATAAGTTACCAGATGATGCACATAAAAAGGTTAAGTTGATGTGCTCCTATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCTTATTATGGTGGACCGCAAGGGTTTGAGAAGGTATTAGATTTGCTTGAAGATGCTTGCGGATCATTGCTAGAAAATATTTTGGCTGAAAATGAACATGTACGACAATCCTAA 783 0.4342 MRTVYSKDGNLTNLRFCHCSQVRTLTPKSSFLVSLIQVPNFTLSITTKTFPFRSSSILCGINRRCVNNNYRRWVIRASMASSTSSPTQRERFSVLFVCLGNICRSPAAEGVFQDLVKKRGLDSKFNIDSCGTIDYHEGNEADPRMREASKKRGIQITSISRPIKPSDFVDFDLILAMDMQNREDILESFNSWRARYKLPDDAHKKVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACGSLLENILAENEHVRQS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0044 260 PRINTS LMW phosphotyrosine protein phosphatase signature 137 153 IPR017867 GO:0004725|GO:0006470
Ahy3g0044 260 PRINTS LMW phosphotyrosine protein phosphatase signature 221 236 IPR017867 GO:0004725|GO:0006470
Ahy3g0044 260 PRINTS LMW phosphotyrosine protein phosphatase signature 94 111 IPR017867 GO:0004725|GO:0006470
Ahy3g0044 260 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 70 255 - -
Ahy3g0044 260 SMART LMWPc_2 92 249 IPR023485 -
Ahy3g0044 260 Gene3D - 75 255 - -
Ahy3g0044 260 CDD LMWPTP 93 248 - -
Ahy3g0044 260 Pfam Low molecular weight phosphotyrosine protein phosphatase 94 247 IPR023485 -
Ahy3g0044 260 SUPERFAMILY Phosphotyrosine protein phosphatases I 91 250 IPR036196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0044 Ahy-Chr3 427685 430013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0044 35 254 Protein tyrosine phosphatase (PTP) family AT3G44620 55.133 2.67e-89 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0044 K25307 - gmx:100797254 334.339