Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0028 ATGGCGAGCCAAAGAATAGGAGGAGACACTGGTTTATCAGAGTCACTGATCACAAGTCATCACCATGCCTCTACTCATGGAGTTCTTCATGGAATCAACTCCCCATCATCAACCTTAATGAACGAAGGGGGAGCGTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAATCAAGACTAGAAATGATGAAGAAGCCAAAGCATCATGGAGGCCTGCAGCAACACTGGAAATGTTCCCTTCATGGCCAATCAGATTCCACCAAACCTCAAGAGGAGGTTGCAAGTCAGGAGGATGGGATGAAAACACAGACTCAGGATCAGGATCAGGTGTGAACACCAACACCCTTTCAAGCAAATTGGAAACGGAACCCCATCATAATCATTTTGAATCACAAGATTCTCCAATTAGTAGCCAACAACAAGAAGATCAAGAGGTGCAGCTGGCAACTAGTGATGCCTCAAGAAAAGGGCCATCACCCCAACAAAAGAAAAAAGGAGCGAGTTCCACATCAGAGAAGGCAGTGGATGCAAAGGTGAAGACACTGAGACGGTTGGCACAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAGTGTAGCAGATTAAAGCTTACTCAGCTGGAAAAGGAGGTAGAAAGAGCAAGATCACAGGTATCAGGAACAGGAGGAGGAGGAGGAGGAGGAGCAATGATGTTTGACATGGAATATGGAAGATGGCTGGAAGATGAAGAGAGGCAGATGGGGGAGGTGAGGAGGGGGCTGGAGGGGGGAATATCGGACGGGGAGATGAGAGTGATAGTGGAGAGTTACATGAGCCACTACGACGAACTCTTCAGGCTGAAGGCGGAGGGTGCCAAGTGGGACGTGTTCCACATCATGAATGGCACATGGACATCCCCCGCAGAGAGGTGCTTCCTGTGGATGGGTGGTTTCAGGCCGTCAGACCTGGTGGGATTGCTGATACACCAGTTGGAGCCTCTTGCGGAGCAGCAGATCATAGCCATGTACGGACTGAGACACTCATCCCAGCAGGCTGAAGACGCTCTTTCTCAGGGGCTTGAGCAGCTCCACCACTCTCTCCTCCACACCATCTCCCTCCCTCAGATGCTTTCTGCCATGGCCAAGCTTTCCAACCTTGAAGCTTTCCTCCTTCAGGCTGATCATCTGAGGCAGCAAACTCTTCACCAATTCTGTCGATTTCTCACCATTCGTCAAGCAGCTCGCTGTTTCCTTGTCATTGGAGACTACTATGCTCGTCTTCGCGCCCTTAGTTCTCTTTGGGCCTCCAGGACCCTCATCAACAATCATCACGATAACTCATCCATCGACTTGCAAACGCAAAATCATTTCTCTAATTTCTGA 1395 0.4932 MASQRIGGDTGLSESLITSHHHASTHGVLHGINSPSSTLMNEGGAFDFGELEEAIVLQGIKTRNDEEAKASWRPAATLEMFPSWPIRFHQTSRGGCKSGGWDENTDSGSGSGVNTNTLSSKLETEPHHNHFESQDSPISSQQQEDQEVQLATSDASRKGPSPQQKKKGASSTSEKAVDAKVKTLRRLAQNREAARKSRLRKKAYVQQLECSRLKLTQLEKEVERARSQVSGTGGGGGGGAMMFDMEYGRWLEDEERQMGEVRRGLEGGISDGEMRVIVESYMSHYDELFRLKAEGAKWDVFHIMNGTWTSPAERCFLWMGGFRPSDLVGLLIHQLEPLAEQQIIAMYGLRHSSQQAEDALSQGLEQLHHSLLHTISLPQMLSAMAKLSNLEAFLLQADHLRQQTLHQFCRFLTIRQAARCFLVIGDYYARLRALSSLWASRTLINNHHDNSSIDLQTQNHFSNF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0028 464 PANTHER TRANSCRIPTION FACTOR TGA9 65 442 - -
Ahy3g0028 464 Coils Coil 201 228 - -
Ahy3g0028 464 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Ahy3g0028 464 MobiDBLite consensus disorder prediction 102 122 - -
Ahy3g0028 464 ProSiteProfiles DOG1 domain profile. 240 441 IPR025422 GO:0006351|GO:0043565
Ahy3g0028 464 MobiDBLite consensus disorder prediction 91 181 - -
Ahy3g0028 464 MobiDBLite consensus disorder prediction 133 170 - -
Ahy3g0028 464 Pfam bZIP transcription factor 179 223 IPR004827 GO:0003700|GO:0006355
Ahy3g0028 464 SUPERFAMILY Leucine zipper domain 182 227 IPR046347 GO:0003700|GO:0006355
Ahy3g0028 464 Pfam Seed dormancy control 257 331 IPR025422 GO:0006351|GO:0043565
Ahy3g0028 464 Gene3D - 181 232 - -
Ahy3g0028 464 SMART brlzneu 178 231 IPR004827 GO:0003700|GO:0006355
Ahy3g0028 464 PANTHER TRANSCRIPTION FACTOR TGA9 65 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0028 Ahy-Chr3 279137 282758 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0028 118 464 bZIP Transcription Factor Family AT1G08320 55.405 3.55e-133 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy3g0028 DOG1 1.80E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0028 K14431 - gmx:100101904 532.717