Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0022 ATGAGGGACTGCAAGAACAGTGGCGGTGCAAAGGAAGAACACGATGAAGAGAAAGTGACAGTGGCTTTGCATATTGGGCTCCCTAACAACAACAACAACAACAGCAGCAGCAATGAGAGGAAGAAGGTTTTCCATGATGATGCAGCAGAGAGATTCTGGATACCAACGGCAGCACAGACCTTCACTAGATATAACAACATGCAGATGCATATGTGGGGGCATGAATGGGAATATAGTAAAGGAGCAGAGTCACTGAAAGGAACACAGGCAGCGGGAATGCTAAGGTTAGCATGTTATTGTTGCGCTGAAGGATGCAAGAACAACATAAAGCATCCAAGGGCAAAGGCATTGAAGGACTTGAGGACCCTCCAAACACACTACAAGAGGAAGCATGGCACAAAGGCATTCATGTGCAGGAAATGTGGCAAGCTTTGGTATTGCACTTGCGGTTCCGACAACAAGCACAAAAGGTCCCTCAAAGATCACGTTACATCCTTTGGAAGGGGCCATAATCCTCATTATCTGAATTCAGAGACTTCGCTTTTGCTTTAA 552 0.4583 MRDCKNSGGAKEEHDEEKVTVALHIGLPNNNNNNSSSNERKKVFHDDAAERFWIPTAAQTFTRYNNMQMHMWGHEWEYSKGAESLKGTQAAGMLRLACYCCAEGCKNNIKHPRAKALKDLRTLQTHYKRKHGTKAFMCRKCGKLWYCTCGSDNKHKRSLKDHVTSFGRGHNPHYLNSETSLLL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0022 183 PANTHER ZINC FINGER PROTEIN WIP2 5 174 IPR043584 GO:0003700|GO:0010468
Ahy3g0022 183 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 5 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0022 Ahy-Chr3 217479 220059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0022 15 172 C2H2 Transcription Factor Family AT1G51220 48.858 1.02e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0022 - - ahf:112784494 388.652