Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0015 ATGGCGGAGGAGGCGAAAGCGGTGCCGGAGGCGGAAGAGCTTCCCAGGACTATCGTGCGCCGCATCGTGAAGGATAAGATATCCCGATGCTCCGAAGACGGAGACATATCCGTCAACAAAGACGCACTTCTTGCATTCTCTGAAAGCGCCAGGATCTTTATCCACTACATTTCCGCAACAGCTAATGACATTTGTAAGGAGTCAAAGAGGCAGATAGTCAATGCTGATGATATTTTCAAAGCTCTTGAAGAAACTGACTTCTCTGAGTTTATCCGCCCTCTTAAAGCTTCTCTTGAAGACTTCAGGAAGAAGAATGCTGGGAAGAAAGCAGCAGTGTCAAAAGAAAAGGAAAGTGAGAAGAACAAGAAAAGGAAGGTGGAAGGGGAGCCATCTGGTAAAGTCAAATCTGATAATGGGGAGTCACCCGAGAAAGGGGATAGTGGTGATGCCGAATGA 456 0.4715 MAEEAKAVPEAEELPRTIVRRIVKDKISRCSEDGDISVNKDALLAFSESARIFIHYISATANDICKESKRQIVNADDIFKALEETDFSEFIRPLKASLEDFRKKNAGKKAAVSKEKESEKNKKRKVEGEPSGKVKSDNGESPEKGDSGDAE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0015 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 82 IPR003958 -
Ahy3g0015 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 144 - -
Ahy3g0015 151 MobiDBLite consensus disorder prediction 104 151 - -
Ahy3g0015 151 Coils Coil 109 129 - -
Ahy3g0015 151 Gene3D Histone, subunit A 3 149 IPR009072 GO:0046982
Ahy3g0015 151 SUPERFAMILY Histone-fold 14 135 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0015 Ahy-Chr3 185722 187490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0015 14 119 CCAAT-HAP3 Transcription Factor Family AT4G14540 28.302 4.24e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy3g0015 CBFD_NFYB_HMF 1.40E-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0015 K02326 - gmx:100306382 196.823