Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0001 ATGCCTAAACATTTTCTTCTTTTTTTATTTTTTTCCGCCCAGGCTTCTTACAGGAAAGCTGGTGTTATTGCGGAACAAACGATCAGTTCAATTAGGACAGTGTTTTCTTTTGTTGCGGAAAGGCAATTGGCAGCAAAATATGCTCAATTACTACAAAAATCAGCCCCAATCGGCGCAAAAATTGGTTTTGCCAAGGGTGCAGGCATGGGCATTATCTATTTAGTAACATATTCGACATGGGCCTTGGCATTTTGGTATGGCTCCATCTTAATTGCCACGAACAAACTTGATGGGGGTGCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGAGGAAGAGGTCTAGCATTGGCGCTGTCATATTTTGCACAATTTGCACAAGGTACAGTTGCAGCAAGTCGTGTATTCTCTATTATAGACAGAATTCCTGAGATTGATCCATATAGCCCTGACGGAAGGAAGCTTACTGTTGTCCGTGGTAGAATTGAGTTAAAAAATGTTAGTTTTGCATACCCATCTCGTCCTGATTCTCTGATACTTCATTCCCTTAATTTAGTATTTTCATCGACAAAAACTTTGGCACTGGTTGGTGCTAGTGGAGGGGGCAAGTCGACTATATTTGCTCTGATAGAGCGGTTCTATGACCCTATTGAAGGGACGATAACCTTGGACGGCCATGATTTGAGGACGTTGCAAGTCAAGTGGCTAAGAGGTCAAATTGGGATGGTTGGTCAAGAGCCAATCCTCTTTGCAACCTCCATACTAGAAAACGTTATGATGGGGAAAGATAATGTCACTAAGGAGGAGGCAATTGCTGCTTGCATTGCTGCAGATGCTCACAATTTCATATCTAACTTACCACTTGGCTATGACACTCAGGTCGGAGATAGGGGCACAAAACTATCAGGTGGTCAAAAGCAGAGAATCGCACTGGCTCGAGCAATAATCAAAGATCCTAAAATCCTTCTTTTAGACGAACCTACCAGCGCTCTTGATGCTGAGTCAGAGTCTGCAGTGCAACGAGCCATCGACAAGATTTCTGTGGGTCGAACAACCATTGTCATTGCTCATAGGATAGCTACTGTAAAGAATGCTCATGCCATCGTGGTCCTCGAAAATGGTACTGCCATTGAGATGGGTAACCATCTCCAGCTTATAGGGAAAGGGGGAACCTACTATAACCTTGTCAAACTCGCCACCGAGGCCATATCAAGGCCTCTCTCTAATGAACATGACATGCAAAAATCCAATGATCTTTCCATCTATGACAACTCAATTGCTGATGTATCAAGATATGCAGCAGATATCTCGAGGCCTAAACATTTAAAATACGCTCAGGAGAAAAAACTAGAGATCGAAGACGAGCCAAACAAAATGCCAACAAAATTTAGACTTTCTGAGATATTGAAATTGCAAAAGCCAGAGCTTTGGATGCTACTTTTAGGATTCTTTCTGGGTATGTTTGCAGGCGCTTTTCTGTCTCTTTTTCCTTTGGTTTTAGGCATATCTCTTGGGGTATATTTTGATGATGACACTGATAAGATGAAGAGAGATGTTGGACACCTTTGTTTAGCACTTGTTTGTCTTGGATTCGGTTGTATTCTTTCCATGACAGGACAACAAGGATTTTGTGGTTGGGCAGGATCAAAGCTTACACTAAGGGTTAGAAACCTCTTGTTCCAGTCCATCTTGAAACAAGAACCTGGGTGGTTTGATTTTGATAAAAACTCGACTGGAGTGTTAGTGTCAAGGCTCTCCATTGATTGTATCAGCTTTCGTTCAATACTTGGTGATCGATTCTCAGTCCTTCTTATGGGGATGAGTTCAGCAGCTGTCGGTCTTGGTGTTTCCTTTGTCATCAATTGGAAACTAACCCTTTTGGCGGCTGCTGTTACTCCCTTTACTCTTGGTGCAAGTTATGTAAGCTTGCTTATAAATATTGGGCCACATGTTGATAACAATGCATATGCCAAAGCTAGCAATATTGCTTCTGGTGCAGTATCAAACATAAGAACGGTTACCACGTTTTCTGCCCAGGAAATATTAATTAAGTCCTTTGATCAAGCCTTATCAGAACCTCAAAGGAAATCATTGAAAAGTTCGCACATTCAAGGTCTAACATTTGGGTTCTTTCAAGGAGCCATGTATGGAGCGTACACCTTGGTTCTTTGGTTTGGTGCCAGACTTGTAGATCGTAGCGAAGCGAAGTTCGGAGATGTTTTTAAGATCTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCGGATACTTCTATGGCGGCCACAGCAATCCCTTCTGTTCAAGATATCATAAACCGGAGGCCGCTGATAGGCAACGATAAGTCAATAAGAAGCAAGAAAGTAGAAGATCGATTAAAGTCGCCTTTCAAAATAGAATTCAAAATGGTCACATTTGCATACCCATCTAGGCCTGCAGTTACAGTGCTAAGGGATTTCTCTTTGAAGGTCAAAGGTGGAAGCACCGTGGCCTTGGTAGGACCCAGTGGATCAGGAAAATCAACCATCATATGGTTGATACAGAGGTTCTATGATCCAAATAAAGGAAAAGTGATGCTAAGTGGGGTAGACCTTATGGAAATTGATGTTAAGTGGTTAAGGAGGCAAATGGCTTTAGTAGGTCAAGAACCAGCACTGTTTTCTGGGAGTATAAGGGAGAACATTACCTTTGGGGACCCAAATGCGTCATGGGCTGAAATTGAAGCAGCTGCAAAAGAAGCTTACATCCACAAATTCATTAGTGGCCTTCCTCAAGGTTATGAGACCCAGGTTGGTCAAAGCGGGGTCCAACTATCAGGTGGCCAAAAACAAAGAATTGCAATAGCAAGGGCTATACTGAAGAAATCAAGGGTGATTCTACTTGATGAAGCAAGCAGTGCTTTGGACTTGGAGTCAGAGAAACACATCCAAGATGCCCTTAAGAAAGTTTCCAATGAAGCAACAACCATCATTGTAGCCCATCGTCTATCGACAATTAGAGAAGCTGACAAGATAGTGGTTATGAAAGATGGGGGAGTAGCAGAGTATGGAAGTCATGACACACTGATGACTTCCCATCAAAATGGTCTGTATGCTAGCCTAGTTCGTTCTGAGACCGAAGCCAATGCCTTTGCTTGA 3156 0.4249 MPKHFLLFLFFSAQASYRKAGVIAEQTISSIRTVFSFVAERQLAAKYAQLLQKSAPIGAKIGFAKGAGMGIIYLVTYSTWALAFWYGSILIATNKLDGGAAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFSIIDRIPEIDPYSPDGRKLTVVRGRIELKNVSFAYPSRPDSLILHSLNLVFSSTKTLALVGASGGGKSTIFALIERFYDPIEGTITLDGHDLRTLQVKWLRGQIGMVGQEPILFATSILENVMMGKDNVTKEEAIAACIAADAHNFISNLPLGYDTQVGDRGTKLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESAVQRAIDKISVGRTTIVIAHRIATVKNAHAIVVLENGTAIEMGNHLQLIGKGGTYYNLVKLATEAISRPLSNEHDMQKSNDLSIYDNSIADVSRYAADISRPKHLKYAQEKKLEIEDEPNKMPTKFRLSEILKLQKPELWMLLLGFFLGMFAGAFLSLFPLVLGISLGVYFDDDTDKMKRDVGHLCLALVCLGFGCILSMTGQQGFCGWAGSKLTLRVRNLLFQSILKQEPGWFDFDKNSTGVLVSRLSIDCISFRSILGDRFSVLLMGMSSAAVGLGVSFVINWKLTLLAAAVTPFTLGASYVSLLINIGPHVDNNAYAKASNIASGAVSNIRTVTTFSAQEILIKSFDQALSEPQRKSLKSSHIQGLTFGFFQGAMYGAYTLVLWFGARLVDRSEAKFGDVFKIFLILVLSSFSVGQLAGLAPDTSMAATAIPSVQDIINRRPLIGNDKSIRSKKVEDRLKSPFKIEFKMVTFAYPSRPAVTVLRDFSLKVKGGSTVALVGPSGSGKSTIIWLIQRFYDPNKGKVMLSGVDLMEIDVKWLRRQMALVGQEPALFSGSIRENITFGDPNASWAEIEAAAKEAYIHKFISGLPQGYETQVGQSGVQLSGGQKQRIAIARAILKKSRVILLDEASSALDLESEKHIQDALKKVSNEATTIIVAHRLSTIREADKIVVMKDGGVAEYGSHDTLMTSHQNGLYASLVRSETEANAFA* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0001 1051 CDD ABC_6TM_Pgp_ABCB1_D2_like 469 784 - -
Ahy3g0001 1051 Pfam ABC transporter 823 971 IPR003439 GO:0005524
Ahy3g0001 1051 CDD ABC_MTABC3_MDL1_MDL2 162 399 - -
Ahy3g0001 1051 Pfam ABC transporter 180 329 IPR003439 GO:0005524
Ahy3g0001 1051 CDD ABC_MTABC3_MDL1_MDL2 805 1042 - -
Ahy3g0001 1051 Gene3D - 793 1045 IPR027417 -
Ahy3g0001 1051 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 805 1041 IPR003439 GO:0005524
Ahy3g0001 1051 PANTHER ABC TRANSPORTER B FAMILY 14 1050 - -
Ahy3g0001 1051 Gene3D - 160 418 IPR027417 -
Ahy3g0001 1051 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 480 766 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g0001 1051 SUPERFAMILY ABC transporter transmembrane region 467 782 IPR036640 GO:0005524|GO:0016021
Ahy3g0001 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 801 1042 IPR027417 -
Ahy3g0001 1051 Gene3D ABC transporter type 1, transmembrane domain 768 1047 IPR036640 GO:0005524|GO:0016021
Ahy3g0001 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 398 IPR027417 -
Ahy3g0001 1051 ProSitePatterns ABC transporters family signature. 301 315 IPR017871 GO:0005524
Ahy3g0001 1051 SMART AAA_5 832 1018 IPR003593 -
Ahy3g0001 1051 SMART AAA_5 189 390 IPR003593 -
Ahy3g0001 1051 ProSitePatterns ABC transporters family signature. 944 958 IPR017871 GO:0005524
Ahy3g0001 1051 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 9 127 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g0001 1051 Pfam ABC transporter transmembrane region 13 108 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g0001 1051 Pfam ABC transporter transmembrane region 479 750 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g0001 1051 Gene3D ABC transporter type 1, transmembrane domain 13 767 IPR036640 GO:0005524|GO:0016021
Ahy3g0001 1051 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 398 IPR003439 GO:0005524
Ahy3g0001 1051 SUPERFAMILY ABC transporter transmembrane region 10 147 IPR036640 GO:0005524|GO:0016021
Ahy3g0001 1051 PANTHER - 14 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0001 Ahy-Chr3 12047 19718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0001 510 1051 Calmodulin-binding Proteins AT2G36910 36.765 5.49e-102 347