Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2675 ATGGGTAACATAGGAAGTAGTAGTGCCAGCAACCGCAGAAGACACGGTGGTGGCGGTGGCGGAAGTGGACGGAGGATCCATCCTCCACCTCTTCCTCCGCCGCCGGTGACGCCACAGCCGGAAATCACAGCCAATCGGTTCGTGTACCCTGCTGCTGCGACTCCATATCATAACTATCCCGGTTATTATCCGCCGCCGGTGCCTTTGCCGGCACCCTATGACCACCACCACCGGCCCGCGGCGGTGGAGCCGATGTGGGGGCGGTATCCTCCGCCGGCAGCGCCTATGCCTCCGACGCCGTATGTGGAGCACCAGAAGGCGGTTACTATAAAAAATGATGTGAACATCAAGAAGGAAACTTTGAGGATTGAAGCTGATGAAGAGAACCCTGGGAAGTTCCTTGTTTCATTCACATTTGACGCCACCGTTTCTGGGAGCATTACTATACTTTTCTTTGCAAAAGAAGGTGAAGGCTGCATCCTTACTCCAATGAAGGAAGATTCTCTTCCACCTGTGACTGTACATTTCCAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGCTGGAACTGGTATTGATTTTTTGCAATTTGAGGAGTCCGAGTTATTGAAAGTGGGAGAGATGGATATCTATCCTCTAGTAGTTAAGGCAGATGCAATGTTGGGCGATCATGACGGATCAAATGAGACTCCAAAGCATGGATCAAATGAAACTCGAAATGAAGGATCTAATGAAACTCCAAATGACGGACCTAATGAAACTCCAGTAACAGGTATTACAAACTCGCAGATAACAAAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCAGGTGAAGGTTGTCAAGCAGATCTTGTGGGTGAATGGATTGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAATTCAGTGGAGAGTGAAGTGGATGGAAATGACCCAGGAAAAGAATGTGTTATTTGTCTGTCAGAGCCCAGGGATACGACTGTCCTTCCTTGCCGTCACATGTGCATGTGTAGTGGATGTGCGAAGGTTTTGAGGTTCCAGACAAATAGGTGTCCAATCTGCAGACAGCCAGTTGAGAGGCTTCTGGAGATCAAGGTTGGGGCAGAAGCCGAACCTCAGGAGTGA 1128 0.4947 MGNIGSSSASNRRRHGGGGGGSGRRIHPPPLPPPPVTPQPEITANRFVYPAAATPYHNYPGYYPPPVPLPAPYDHHHRPAAVEPMWGRYPPPAAPMPPTPYVEHQKAVTIKNDVNIKKETLRIEADEENPGKFLVSFTFDATVSGSITILFFAKEGEGCILTPMKEDSLPPVTVHFQQGLGQKFRQPAGTGIDFLQFEESELLKVGEMDIYPLVVKADAMLGDHDGSNETPKHGSNETRNEGSNETPNDGPNETPVTGITNSQITKAVFEKEKGEFQVKVVKQILWVNGLRYELQEIYGIGNSVESEVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGAEAEPQE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2675 375 MobiDBLite consensus disorder prediction 240 260 - -
Ahy2g2675 375 SMART ring_2 317 355 IPR001841 -
Ahy2g2675 375 ProSiteProfiles Zinc finger RING-type profile. 317 356 IPR001841 -
Ahy2g2675 375 MobiDBLite consensus disorder prediction 222 260 - -
Ahy2g2675 375 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 316 356 IPR045195 -
Ahy2g2675 375 Pfam Zinc finger, C3HC4 type (RING finger) 315 361 - -
Ahy2g2675 375 PANTHER MAHOGUNIN 243 372 IPR045194 GO:0061630
Ahy2g2675 375 MobiDBLite consensus disorder prediction 1 41 - -
Ahy2g2675 375 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 238 - -
Ahy2g2675 375 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 243 372 - -
Ahy2g2675 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 366 IPR013083 -
Ahy2g2675 375 PANTHER MAHOGUNIN 1 238 IPR045194 GO:0061630
Ahy2g2675 375 MobiDBLite consensus disorder prediction 26 40 - -
Ahy2g2675 375 MobiDBLite consensus disorder prediction 222 239 - -
Ahy2g2675 375 SUPERFAMILY RING/U-box 316 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2675 Ahy-Chr2 102782563 102786095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2675 87 336 C3H Transcription Factor Family AT3G09770 60.547 7.38e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2675 - - aip:107626498 678.322