Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy2g2671 | ATGGGTAACATAGGAAGTAGTAGTGCCAGCAACCGCAGAAGACACGGTGGTGGCGGTGGCGGAAGTGGACGGAGGATCCATCCTCCACCTCTTCCTCCGCCGCCGGTGACGCCACAGCCGGAAATCACAGCCAATCGGTTCGTGTACCCTGCTGCTGCGACTCCATATCATAACTATCCCGGTTATTATCCGCCGCCGGTGCCTTTGCCGGCACCCTATGACCACCACCACCGGCCCGCGGCGGTGGAGCCGATGTGGGGGCGGTATCCTCCGCCGGCAGCGCCTATGCCTCCGACGCCGTATGTGGAGCACCAGAAGGCGGTTACTATAAAAAATGATGTGAACATCAAGAAGGAAACTTTGAGGATTGAAGCTGATGAAGAGAACCCTGGGAAGTTCCTTGTTTCATTCACATTTGACGCCACCGTTTCTGGGAGCATTACTATACTTTTCTTTGCAAAAGAAGGTGAAGGCTGCATCCTTACTCCAATGAAGGAAGATTCTCTTCCACCTGTGACTGTACATTTCCAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGCTGGAACTGGTATTGATTTTTTGCAATTTGAGGAGTCCGAGTTATTGAAAGTGGGAGAGATGGATATCTATCCTCTAGTAGTTAAGGCAGATGCAATGTTGGGCGATCATGACGGATCAAATGAGACTCCAAAGCATGGATCAAATGAAACTCGAAATGAAGGATCTAATGAAACTCCAAATGACGGACCTAATGAAACTCCAGTAACAGGTATTACAAACTCGCAGATAACAAAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCAGGTGAAGGTTGTCAAGCAGATCTTGTGGGTGAATGGATTGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAATTCAGTGGAGAGTGAAGTGGATGGAAATGACCCAGGAAAAGAATGTGTTATTTGTCTGTCAGAGCCCAGGGATACGACTGTCCTTCCTTGCCGTCACATGTGCATGTGTAGTGGATGTGCGAAGGTTTTGAGGTTCCAGACAAATAGGTGTCCAATCTGCAGACAGCCAGTTGAGAGGCTTCTGGAGATCAAGGTTGGGGCAGAAGCCGAACCTCAGGAGTGA | 1128 | 0.4947 | MGNIGSSSASNRRRHGGGGGGSGRRIHPPPLPPPPVTPQPEITANRFVYPAAATPYHNYPGYYPPPVPLPAPYDHHHRPAAVEPMWGRYPPPAAPMPPTPYVEHQKAVTIKNDVNIKKETLRIEADEENPGKFLVSFTFDATVSGSITILFFAKEGEGCILTPMKEDSLPPVTVHFQQGLGQKFRQPAGTGIDFLQFEESELLKVGEMDIYPLVVKADAMLGDHDGSNETPKHGSNETRNEGSNETPNDGPNETPVTGITNSQITKAVFEKEKGEFQVKVVKQILWVNGLRYELQEIYGIGNSVESEVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGAEAEPQE* | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy2g2671 | 375 | MobiDBLite | consensus disorder prediction | 240 | 260 | - | - | |
Ahy2g2671 | 375 | SMART | ring_2 | 317 | 355 | IPR001841 | - | |
Ahy2g2671 | 375 | ProSiteProfiles | Zinc finger RING-type profile. | 317 | 356 | IPR001841 | - | |
Ahy2g2671 | 375 | MobiDBLite | consensus disorder prediction | 222 | 260 | - | - | |
Ahy2g2671 | 375 | CDD | mRING-HC-C3HC5_MGRN1_like---blasttree | 316 | 356 | IPR045195 | - | |
Ahy2g2671 | 375 | Pfam | Zinc finger, C3HC4 type (RING finger) | 315 | 361 | - | - | |
Ahy2g2671 | 375 | PANTHER | MAHOGUNIN | 243 | 372 | IPR045194 | GO:0061630 | |
Ahy2g2671 | 375 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Ahy2g2671 | 375 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE | 1 | 238 | - | - | |
Ahy2g2671 | 375 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE | 243 | 372 | - | - | |
Ahy2g2671 | 375 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 301 | 366 | IPR013083 | - | |
Ahy2g2671 | 375 | PANTHER | MAHOGUNIN | 1 | 238 | IPR045194 | GO:0061630 | |
Ahy2g2671 | 375 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Ahy2g2671 | 375 | MobiDBLite | consensus disorder prediction | 222 | 239 | - | - | |
Ahy2g2671 | 375 | SUPERFAMILY | RING/U-box | 316 | 361 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy2g2671 | Ahy-Chr2 | 102742344 | 102745874 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy2g2671 | 87 | 336 | C3H Transcription Factor Family | AT3G09770 | 60.547 | 7.38e-97 | 290 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy2g2671 | - | - | aip:107626498 | 678.322 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy12g3088 | 12 | 120340269 | 120343799 | Ahy2g2671 | 2 | 102742344 | 102745874 | hybridization | |
Ahy16g1596 | 16 | 40787224 | 40790087 | Ahy2g2671 | 2 | 102742344 | 102745874 | PCT | |
Ahy6g1435 | 6 | 29597607 | 29600467 | Ahy2g2671 | 2 | 102742344 | 102745874 | PCT | |
Ahy2g2671 | 2 | 102742344 | 102745874 | Ahy16g1596 | 16 | 40787224 | 40790087 | PCT | |
Ahy2g2671 | 2 | 102742344 | 102745874 | Ahy6g1435 | 6 | 29597607 | 29600467 | PCT |