Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2638 ATGATTAGGGCTTTTGTTGGGAGCATAATAAGAAAGGGTCTCTCAGTGTTGTTTGTAGCAATAAGGGGAAGTGGTAGTTCAGAAGAACATTTGATGTATTTCAATGATGAAGTTGATGATGAAACTGTGGAAGGGTATTTCACTGTTCTTGCCACAAAGGGCAAAGAAACAAGAAGGTTCAGTGTTGAGTTAGATTGCTTGACTGATCCTGCATTCTTGGGACTTCTTGATCAAGCTCAAGAAGAGTATGGCTTCAGACAGAAAGGAGCTATTTCTGTTCCTTGTAGGCCTCAAGAACTTCAGAAGATTCTAGATGATATGAAAGCATAG 330 0.397 MIRAFVGSIIRKGLSVLFVAIRGSGSSEEHLMYFNDEVDDETVEGYFTVLATKGKETRRFSVELDCLTDPAFLGLLDQAQEEYGFRQKGAISVPCRPQELQKILDDMKA* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2638 109 Pfam Auxin responsive protein 37 104 IPR003676 GO:0009733
Ahy2g2638 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 108 IPR003676 GO:0009733
Ahy2g2638 109 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2638 Ahy-Chr2 102456886 102457473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2638 4 104 Calmodulin-binding Proteins AT3G43120 30.693 8.67e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2638 - K14488 adu:107476287 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3054 12 120054811 120055398 Ahy2g2638 2 102456886 102457473 hybridization