Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2453 ATGGCGACATATTTTCATGGTAATTCGGAAATTCAAGGTGGTGGTGTTGATGGCGGCCTTCAAACTCTTGTCCTCATGAACCCCGGGTACATACAATTCTCCGACACGCCGCCGCCTCCGCCACCACACGGCGGAAACCTTATGCTTCTCAACTCTCTCGCTGCCGCCGGAAACTCCTCCCTCGCATCTCACGCGCCGCTATCACAACAGTTCCTTGGTGTGCCTCTCGCGGCCGAGCACATGCACGGCCACCATGATGTCTCGGTTGCCCTGCATGGTTACGCGCCGCGAGGGCACTACAACCTTTGGAACACAATTGACCCTACTACTGCGGCGCGTGATGCTACACGCGCCACACAAGGACTCTCTCTAAGCCTTCCAGCTATGTCGGGGGACGAGGTTCGAGTCTCCGGTGGGTCCCCGTCTTCTGCTTCCGGGGTTACCAACGGTGGAGGCGGTGTTTCGGGAATTCAGAGTGTGTTATTGAATTCAAAGTACTTGAGGGCCACACAAGAGCTTCTAGAAGAGGTTGTGAATGTTAATAATAACAACGATGTTAATAATAATAATAATATGAAGAAGAAGAGTTTTGAGAAGGCTAAGGTTGGTGTCGGAGAATCTTCATCAAACGGTGGTAATAGTGGCGGAGATGGTTCGGTTGGTGAAGGAAGTGAGAAGCGTTGTGCTGAGTTATCAACCACAGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGTTAATCACCATGCTTGATGAGGTGGAGCAAAGATACAGGCAATACCATAATCAAATGCAGATAGTAATATCATCATTTGAGCAAGCAGCTGGGATTGGATCAGCAAGAACATACACTGCCCTTGCATTGCAAACAATCTCAAAGCAATTTAGGTGCTTGAAGGATGCCATAACTGGACAAATTAAAGCTGCAAATAAGAGCTTAGGTGAAGAGGACTACTTTGGTGGTGGTGGAGGCAAAATTGAAGGGTCAAGGCTTAAATATGTTGACCATCATCTAAGGCAACAGAGAGCTATACAACAATTGGGAATGATGCATCACAATGCTTGGAGACCCCAGAGAGGACTCCCGGAGAGATCGGTTTCCGTTCTACGCGCTTGGCTATTCGAACATTTTCTTCATCCTTATCCCAAGGATTCAGACAAACACATGCTTGCAAAACAAACAGGGCTTACAAGGAGCCAGGTATCAAATTGGTTCATAAATGCAAGAGTTAGGCTTTGGAAACCAATGGTGGAGGAAATGTACTTAGAGGAAATGAAGGATCATGATATGAACAATAGTAACAACAACAATGTCTCTGAGGACAACAAATCAAGCAAGAGCAATGAAGATCCAAACAATGCTAAAAATTCACCACCTCGAGACAGCAATTCTGAATCTGATACCAAAAAGAGCTTCAATTCGAAACAAGAAAACGTTTCAATTTCGACACCAACTTCGCAAATTGGTGGAAATTCAAGGAACAACAACAATAATAATAGTTCAGGATTCAGCTTCATGGGGTCATCAGAATTATTAGATGGAATCACACAAGGTAGTAGTCCTAAGAAGCCAAGGAGCAATGAAATTGTTCATCATAGCCAAAACAATAATAATAATAATAATAACAACAATGAATACTCGTTCATCAATAATGTTGGGAACCAAACAAACTTCATTGGTGGATTTGGACAATACCCTATTGATGAAATTGCAAGATTTGATGCTGCTGCTGCTGAAAATTTTACAAGATTCTCAGGTAATAATAATCATAGTAACAATAATGGTGTATCACTCACTCTTGGTCTTCCACATTGTGACACATTCCAGAACATTCAACTAGGAAGAAGATTGGATCGTATGAGTGGTGAACAACATTCAAATGAGTTTGGTGCAGTTAACAACACTCAAAATCCTCACCACTCTTCAGCTGCATTTCAGAGTATGCAGAATTCAAAGAGGTTTGCTGCACAATTGTTGCCAGATTATGTGGCCTAA 1995 0.4336 MATYFHGNSEIQGGGVDGGLQTLVLMNPGYIQFSDTPPPPPPHGGNLMLLNSLAAAGNSSLASHAPLSQQFLGVPLAAEHMHGHHDVSVALHGYAPRGHYNLWNTIDPTTAARDATRATQGLSLSLPAMSGDEVRVSGGSPSSASGVTNGGGGVSGIQSVLLNSKYLRATQELLEEVVNVNNNNDVNNNNNMKKKSFEKAKVGVGESSSNGGNSGGDGSVGEGSEKRCAELSTTERQEIQMKKAKLITMLDEVEQRYRQYHNQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEDYFGGGGGKIEGSRLKYVDHHLRQQRAIQQLGMMHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKDHDMNNSNNNNVSEDNKSSKSNEDPNNAKNSPPRDSNSESDTKKSFNSKQENVSISTPTSQIGGNSRNNNNNNSSGFSFMGSSELLDGITQGSSPKKPRSNEIVHHSQNNNNNNNNNNEYSFINNVGNQTNFIGGFGQYPIDEIARFDAAAAENFTRFSGNNNHSNNNGVSLTLGLPHCDTFQNIQLGRRLDRMSGEQHSNEFGAVNNTQNPHHSSAAFQSMQNSKRFAAQLLPDYVA* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2453 664 SMART HOX_1 355 419 IPR001356 GO:0003677
Ahy2g2453 664 Gene3D - 350 429 - -
Ahy2g2453 664 MobiDBLite consensus disorder prediction 426 546 - -
Ahy2g2453 664 MobiDBLite consensus disorder prediction 132 151 - -
Ahy2g2453 664 SMART prehox3 155 304 IPR006563 -
Ahy2g2453 664 Pfam Associated with HOX 160 303 IPR006563 -
Ahy2g2453 664 ProSiteProfiles 'Homeobox' domain profile. 352 415 IPR001356 GO:0003677
Ahy2g2453 664 MobiDBLite consensus disorder prediction 473 546 - -
Ahy2g2453 664 CDD homeodomain 355 416 IPR001356 GO:0003677
Ahy2g2453 664 MobiDBLite consensus disorder prediction 136 151 - -
Ahy2g2453 664 MobiDBLite consensus disorder prediction 201 235 - -
Ahy2g2453 664 Pfam Homeobox KN domain 372 411 IPR008422 GO:0003677|GO:0006355
Ahy2g2453 664 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 1 8 616 - -
Ahy2g2453 664 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 616 - -
Ahy2g2453 664 Coils Coil 236 263 - -
Ahy2g2453 664 MobiDBLite consensus disorder prediction 627 646 - -
Ahy2g2453 664 SUPERFAMILY Homeodomain-like 356 422 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2453 Ahy-Chr2 100693982 100700692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2453 1 664 Homeobox Transcription Factor Family AT2G35940 45.358 4.72e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy2g2453 POX 9.30E-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2453 - - gmx:100791773 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2865 12 118291907 118298617 Ahy2g2453 2 100693982 100700692 hybridization