Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2425 ATGGGTATGGAAACTGCATATCTGAAAGAACATGAAGGAATTGTTCACAATTCTGTTGGACAGCTGGCATCAGCAGCAGCAGGTTCTTCATGGTGGAGTATTAGTGCCTTTGGATCTCATCAAAATCAATCATCAGTTTATGGAGATTCGTCTAGTTATAATAATAATAATAATAATAACCAAATTATGAAACCATTTTCATTGGAGCTTCATAATAATAATAATTACATGGACCAACTTTCTTCTTCCACTAATAAGCAACAACAATTCTTGGATAAAGGACCTACAACACAATTTACAATCTTTCCAGAAGATTGCAAAATTTCAGGTGAATCCCAAAAGTCTCAAGCCACATTATCTTTGCAGCCATCAAATGCTGACCCTAGGAACCGTTTTGAGCTTGGATTCACTCAGCCTATGATATGTGCAAAATATCCTTACATGGATCAATTTTATGGACTCTTCTCAGCTTATGCACCTCAAATTTCGGGGCGTATAATGCTGCCACTAAACTTGACATCAGATGATGGACCAACTTACGTGAATGCTAAGCAATACCATGGAATCATAAGGCGTAGGCAGTCACGTGCCAAAGCTGTTCTTGCCAATAAACTCATCAAACGCCGCAAGCCATATATGCATGAATCGCGCCATCTCCACGCGATGCGACGGCCAAGAGGATGTGGTGGCAGGTTCTTGAACACAAGAAACTCTGCCACCAACAATGGAAATGGCAAGAGTGGAAGTGAAGCAAACAAAAAAGGACTTGGCCATCAACTACATTCTAGTGGTTCCCAGAGTTCTGAAGTCCTACAATCTTCGGCCGGAACGTTGAATTCGTTGAAGGAAACAAATGGAAGCAGTCCAAATATTTCATTAGAGGTGACAAGCATGTACTCATCAAGAGGAATTGATGGATTTGCCATCAATCACATTGGAACTCCTATGCACTCCCTTGCAGATATGATGGACACTGGACATGGACATGGCATGATCATGCCCCCGAAATGGGTTTCAGCTGCGGCTGGAAACTGCTGCAACCTTAATGTTTGA 1053 0.415 MGMETAYLKEHEGIVHNSVGQLASAAAGSSWWSISAFGSHQNQSSVYGDSSSYNNNNNNNQIMKPFSLELHNNNNYMDQLSSSTNKQQQFLDKGPTTQFTIFPEDCKISGESQKSQATLSLQPSNADPRNRFELGFTQPMICAKYPYMDQFYGLFSAYAPQISGRIMLPLNLTSDDGPTYVNAKQYHGIIRRRQSRAKAVLANKLIKRRKPYMHESRHLHAMRRPRGCGGRFLNTRNSATNNGNGKSGSEANKKGLGHQLHSSGSQSSEVLQSSAGTLNSLKETNGSSPNISLEVTSMYSSRGIDGFAINHIGTPMHSLADMMDTGHGHGMIMPPKWVSAAAGNCCNLNV* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2425 350 Gene3D - 175 237 - -
Ahy2g2425 350 MobiDBLite consensus disorder prediction 233 249 - -
Ahy2g2425 350 PRINTS CCAAT-binding transcription factor subunit B signature 209 232 IPR001289 GO:0003700|GO:0006355
Ahy2g2425 350 PRINTS CCAAT-binding transcription factor subunit B signature 178 200 IPR001289 GO:0003700|GO:0006355
Ahy2g2425 350 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 178 232 IPR001289 GO:0003700|GO:0006355
Ahy2g2425 350 ProSiteProfiles NF-YA/HAP2 family profile. 175 235 IPR001289 GO:0003700|GO:0006355
Ahy2g2425 350 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 3 349 IPR001289 GO:0003700|GO:0006355
Ahy2g2425 350 MobiDBLite consensus disorder prediction 256 273 - -
Ahy2g2425 350 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 3 349 - -
Ahy2g2425 350 SMART cbf3 174 235 IPR001289 GO:0003700|GO:0006355
Ahy2g2425 350 MobiDBLite consensus disorder prediction 224 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2425 Ahy-Chr2 100341598 100347034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2425 132 348 CCAAT-HAP2 Transcription Factor Family AT3G05690 47.845 1.10e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Ahy2g2425 CBFB_NFYA 7.80E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2425 K08064 - gmx:100808195 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2832 12 117937816 117943331 Ahy2g2425 2 100341598 100347034 hybridization