Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2396 ATGTCCTCACCTGAAGTTGCCAATTGGATCAAAGGGAAGAAGCTTACCCAGAAGCTGCTTGAAAGGTTGAAGACTACTCTTTATGCTGTTCAAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTCGATAGTCTCAAAGATGCTATGTATGTTGCTGATGACTTGCTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTCGTTTTCTCAATTTGCAAGATAGGGAGATAGCAAACAGGATGGAAGAAATAATTGAGAGGATAGAGTCTATTGTGAAGCAAAAAGGGACACTTGGTCTTAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACAACATCTCTGGTTGAAAGATCTAGTATATATGGCAGGGAAGAAGACAAGGAGGCCATAGTGAAATTGTTGTTGGATGATGATGACACTGGTGATGGTGATATATCTGTGATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGGTTTACAATGACGAAAAAGTGAAGGAGAATTTTGATTTTCGAGGTTGGGTTTGTGTGTCTGAAGAGTTTGATGTTATTAAGGTCACCAAGACTATAATTGAGGCAATAACTTCGACTTCTTGTAACTTGAAAGATTTGAATTTACTTCAACATGATTTAAAGGAAAGATTGTCAAGACAAAAATTCTTTGTTGTCTTGGATGACGCATGGAATGAGGATTATGAAGATTGGAGTAGGCTTCTAAAACCATTTCAGAATGGGGCGAAGGGGAGTAAAATTCTCATAACCACTAGAAGTAAAAAAGTGGCTTCTGTGGTGCAAACTATTTCACCTTATGAACTAAGTTTACTGTCGGATGAAGATTGTTGGTTAGTGTTTTCAAAACACGCACGCCTTTCCACTGACTCTATGGAAAATCCAACTCTGAAAAAAGTCGGCAAAGATATTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTCGGAGGCTTATTGCGTGGAAATTTTGATGTTGAGTATTGGAATCATATATTGAAGAGTGAGGTATGGAAATTCTCCAATGACAAGATAAAAGTTGTTCCGGCTTTAAGAATCAGTTATTACTATCTTCCTTCATGTCTGAAAGAGTGCTTTGTTTATTGCTAG 1197 0.401 MSSPEVANWIKGKKLTQKLLERLKTTLYAVQAFLIDAEQKQIKERAVKDWLDSLKDAMYVADDLLDEVFTKAATQKDPGTFFSRFLNLQDREIANRMEEIIERIESIVKQKGTLGLREIPKENMSWRITTSLVERSSIYGREEDKEAIVKLLLDDDDTGDGDISVIPIVGMGGIGKTTLAQLVYNDEKVKENFDFRGWVCVSEEFDVIKVTKTIIEAITSTSCNLKDLNLLQHDLKERLSRQKFFVVLDDAWNEDYEDWSRLLKPFQNGAKGSKILITTRSKKVASVVQTISPYELSLLSDEDCWLVFSKHARLSTDSMENPTLKKVGKDIVKKCDGLPLAAQALGGLLRGNFDVEYWNHILKSEVWKFSNDKIKVVPALRISYYYLPSCLKECFVYC* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2396 398 Pfam Rx N-terminal domain 16 78 IPR041118 -
Ahy2g2396 398 PANTHER - 26 398 - -
Ahy2g2396 398 Gene3D - 8 111 - -
Ahy2g2396 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 398 IPR027417 -
Ahy2g2396 398 Gene3D - 298 387 IPR042197 -
Ahy2g2396 398 PANTHER DISEASE RESISTANCE PROTEIN RP 26 398 IPR044974 GO:0006952
Ahy2g2396 398 Pfam NB-ARC domain 142 364 IPR002182 GO:0043531
Ahy2g2396 398 PRINTS Disease resistance protein signature 335 349 - -
Ahy2g2396 398 PRINTS Disease resistance protein signature 165 180 - -
Ahy2g2396 398 PRINTS Disease resistance protein signature 238 252 - -
Ahy2g2396 398 Gene3D - 122 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2396 Ahy-Chr2 100129912 100131572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2396 162 351 WRKY Transcription Factor Family AT5G45050 28.205 8.90e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2396 - - ahf:112730663 523.472