Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2394 ATGGAGAAACCAAATTCAACAACCCTAGCAAGAACAAAATCAGACCAATTAATAGAATCTATGGCGGCGGCTTTAAAATCGCCGCAATCAAGTGACCACTCATCCGGAATGCCGGATAGTGGTGGTGGTGGCGGCAGTGGTACGCTATCAAGGAAGTCGAGCAGGCGGATGATGGTGGCGGCCTCCCCGGGCCGAGGCGGAGGAAAGAACACACACATAAGGAAATCAAGGAGTGCTCAAATAAGCCAAATGAAGTTTGAATTGGATGATTTGAGCAGTGGTGCTGCACTTAGTAGAGCTTCAAGTGCAAGCTTAGGTTTCTCATTCTCATTCACTGGATTCACTATGCCACCTGATGAAATTGCTGATTCTAAACCCTTCAGTGATGATGATATTCCTGAAGATATTGAAGCTGGAACTAAGACAATAAAGTTTCGAACTGAGCCTACTATTCCGATCTATCTTAAGTTCAAAGATGTGAGCTACAAGGTAGTAATGAAAGGCATGACAACAAGTCATGAAAAGGATATATTGAATGGGATAAGTGGATGTGTGAATCCAGGTGAAGTCTTGGCTTTAATGGGTCCCTCAGGCAGTGGAAAAACCACTCTTTTGAATCTCTTAGGTGCTAGAATATGCCATTCCACTATCTCTGGTTCCATCACTTACAATGATCAATCATATTCCAAGTTCTTGAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACTTAACTGTCAAAGAAACATTGACATATGCAGCCAGGCTTAGACTTCCAAAGACATACACAAAGGAGCAAAAGGAAAAGAGAGCTCTTGATGTTATCTATGAGCTTGGTTTGGAGAGGTGTCAAGACACAATGATTGGAGGTTCCTTTGTTCGTGGAGTATCAGGTGGAGAGAGGAAGAGAGTTTGTATTGGAAATGAGATCATAATCAATCCTTCTCTTCTTTTTCTTGATGAACCAACTTCTGGTTTGGATTCAACAACAGCATTGAGAATAGTTCAGATGCTTCAAGACATAGCAGAGGCTGGTAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTCTTTCACAAGTTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGAATTACTTCCAATCTATAGGGTGTTCGCCTCTTATTTCGATGAATCCGGCCGAGTTCTTGCTAGACCTTGCCAATGGAAACATAAATGATGTTTCTCTTCCATCAGAGTTGGAGGACAGAGTTCAAATGGGAACTGTAGAATCTGAAAGACATAGTGGCAAGCCATCTCCAGCAGTTGTACATGAGTATTTGGTGGAGGCATATGAGTCTCGCGTCGCGGAAACAGAGAAGAAAAAGATAATGGCTCCTTCCCCTCTTGATGAAGAAGTTAAGTCCAAAGTTCGTAGTTCTAAGAGGGAATGGGGAGCAAGTTGGTATGAGCAATTCTCTATATTGTTCTGGAGAGGAATCAAAGAAAGGAAGCATGATTATTTCAGTTGGTTGAGAATCACACAAGTTCTGTCCACTGCAATCATCTTGGGATTACTTTGGTGGCAATCAGATACTAAGAACATAAAAGATCTGCAAGATCAGGCTGGACTGCTCTTCTTTATAGCAGTCTTCTGGGGATTCTTCCCTGTATTCACTGCAATATTCACATTTCCTCAAGAGAGAGCAATGCTGAGTAAGGAGCGAGCGGCCGATATGTACAGACTAAGTGCATATTTCTTGGCCAGAACCACAAGTGACCTTCCACTAGACTTGATATTACCAGTATTATTTCTCCTTGTTGTTTACTTCATGGCTGGTTTGAGACTCAGTGCTACTCCCTTTGTCCTCACCATCCTCACTGTTTTCCTCTGCATCGTGGCGGCTCAGGGACTTGGACTTGCTATTGGAGCAACACTCATGGATTTGAAAAGGGCAACAACTTTGGCTTCAGTAACTGTCATGACTTTCATGCTGGCTGGAGGGTTCTTTGTGCAGAGAGTTCCCATATTCATTTCTTGGATCCGGTACATGTCTTTCAATTACCACACCTACAAATTGCTGCTAAAGGTGCAATATGAACACCTAACTCCAGTTGTAAATGGGATCAAAATTGACAGTGGTTTGACAGAGGTTGCTGCTCTGATAGCCATGGTTTTCGGCTACCGGTTCTTGGCTTATCTTTCCTTGCGGCGGATGAAGCTTCAATCCGGAGCATGA 2256 0.4286 MEKPNSTTLARTKSDQLIESMAAALKSPQSSDHSSGMPDSGGGGGSGTLSRKSSRRMMVAASPGRGGGKNTHIRKSRSAQISQMKFELDDLSSGAALSRASSASLGFSFSFTGFTMPPDEIADSKPFSDDDIPEDIEAGTKTIKFRTEPTIPIYLKFKDVSYKVVMKGMTTSHEKDILNGISGCVNPGEVLALMGPSGSGKTTLLNLLGARICHSTISGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDRVQMGTVESERHSGKPSPAVVHEYLVEAYESRVAETEKKKIMAPSPLDEEVKSKVRSSKREWGASWYEQFSILFWRGIKERKHDYFSWLRITQVLSTAIILGLLWWQSDTKNIKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSATPFVLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPVVNGIKIDSGLTEVAALIAMVFGYRFLAYLSLRRMKLQSGA* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2394 751 Gene3D - 154 395 IPR027417 -
Ahy2g2394 751 MobiDBLite consensus disorder prediction 1 15 - -
Ahy2g2394 751 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 155 401 IPR003439 GO:0005524
Ahy2g2394 751 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 745 - -
Ahy2g2394 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 393 IPR027417 -
Ahy2g2394 751 Pfam ABC transporter 178 329 IPR003439 GO:0005524
Ahy2g2394 751 MobiDBLite consensus disorder prediction 1 73 - -
Ahy2g2394 751 MobiDBLite consensus disorder prediction 23 37 - -
Ahy2g2394 751 SMART AAA_5 187 378 IPR003593 -
Ahy2g2394 751 ProSitePatterns ABC transporters family signature. 301 315 IPR017871 GO:0005524
Ahy2g2394 751 Pfam ABC-2 type transporter 496 705 IPR013525 GO:0016020|GO:0140359
Ahy2g2394 751 CDD ABCG_EPDR 152 383 - -
Ahy2g2394 751 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 29 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2394 Ahy-Chr2 100115244 100126447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2394 177 415 Calmodulin-binding Proteins AT2G36910 28.571 3.69e-15 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2801 12 117672409 117684650 Ahy2g2394 2 100115244 100126447 hybridization