Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2325 ATGAACAACCTCAGAAAACAATCACCATGTTTCCCCTTTATACCAATCCTATCCATGATTTTTGCACTGATCTTTTTAGCAACACATCTCAATTATTTCATTGAAGCCCCAAATTTCAAATCAACAACACCACAAGAAGGGAAAAAACATCTCCATTTCCAAAACCATATCCAATTAGTAGCACATTCAAAATGCAAAGGAACACTCTACCCTGATCTCTGTGTCTCAACCTTATCCACATTCCCAAACCTTGAAACAAAAACAATGCCGCAAATAATCTCCAAAGTAGTCAACCACACAGTCCATGAAGTCAAATCTTCATCCAACAACTGCACCACCATAATCAAGAATCTCCAAAACACTCTCAACACCATTGAGAAAAGAGCCTTAGATGATTGTCTCAAACTCTTTGATGACACCATAGTAGAACTCAACACCACCATTCTTGATCTCTCAAAAAACCCATCATCATCATCATCTTCCAACCAAGATTTGCAAACTCTACTTAGTGGGGCAATGACAAATTTGTACACTTGTCTTGATGGTTTCTCACAAAGCAAAAATGGGAATGCTGTGAGAGGGTTGATAGAGGAGAAAGTGATTGAGATATCACATCATGTTAGTAACTCATTGGCAATGTTGAAGAAAGTGAAGACAAGTTTGAAGAAAGAAGAAGTGTTTGCTGAATATGGAACAATGAAGAAAGGGTTCCCTTCATGGGTTTCTGCTAAGGATAGGAAGCTTCTAGAAGGTGGAAATGTGAATGAAACTAAGATTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTTACTACTATTGGTGAAGCTGTAGCTATGGCTCCTAATTCCAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTCGAGAATGTGGAAGTAATTAGAAAGAAGACCAATTTGATGTTTATTGGAGATGGCATTGGAAGGACCATTCTCAAGGCAAGTAGGAATGTTGTCGATGGCTGGACCACTTTTCAATCAGCTACTGTTGCTGTGGTAGGACAAGGCTTCGTAGCTAAGGGCATAACCTTTGAGAACTCAGCCGGGCCAGACAAGCACCAAGCCGTGGCTCTACGAAGCGGCGCCGACTTCTCCGCCTTCTACAAATGCAGCTTCGTCGGCTACCAAGACACCCTCTACGTCCACTCCATGCGCCAATTCTACCGCGACTGCGACATTTACGGCACCGTTGACTTCATATTCGGCAACGCCGCCGTACTCTTCCAAAATTGCAACCTCTACGCACGAAAACCTAACGAGAATCAGAAGAATCTGTTCACCGCACAAGGCAGAGAAGATCCGAACCAGAACACCGGAATTTCGATCTTGAATTGCAAGATCGCCGCCGCATCGGACCTAATTCCGGTCAAATCGTCGTTCAAGAGTTACTTAGGGAGGCCATGGAAACTATACTCGAGAACGGTGTACCTTAGATCTTACATGGAGGATCTGATTGATCCGAAAGGGTGGCTTGAATGGAATGAGACATTTGCATTGGACACACTTTATTATGGTGAGTATATGAATAAGGGGCCAGGTTCAAACACAAGCGGTAGAGTTAATTGGCCAGGTTTTAGGGTTATTAATAGTTCCAATGAAGCAAGCCAATTCACTGTTGGTGAGTTCATACAGGGTAGTGAGTGGTTGAACAACACTGGCATTCCATTCTTCTATAATTTTAGTTGA 1719 0.4218 MNNLRKQSPCFPFIPILSMIFALIFLATHLNYFIEAPNFKSTTPQEGKKHLHFQNHIQLVAHSKCKGTLYPDLCVSTLSTFPNLETKTMPQIISKVVNHTVHEVKSSSNNCTTIIKNLQNTLNTIEKRALDDCLKLFDDTIVELNTTILDLSKNPSSSSSSNQDLQTLLSGAMTNLYTCLDGFSQSKNGNAVRGLIEEKVIEISHHVSNSLAMLKKVKTSLKKEEVFAEYGTMKKGFPSWVSAKDRKLLEGGNVNETKIDVVVAKDGSGNFTTIGEAVAMAPNSSTTRFVIYIKSGAYFENVEVIRKKTNLMFIGDGIGRTILKASRNVVDGWTTFQSATVAVVGQGFVAKGITFENSAGPDKHQAVALRSGADFSAFYKCSFVGYQDTLYVHSMRQFYRDCDIYGTVDFIFGNAAVLFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLIPVKSSFKSYLGRPWKLYSRTVYLRSYMEDLIDPKGWLEWNETFALDTLYYGEYMNKGPGSNTSGRVNWPGFRVINSSNEASQFTVGEFIQGSEWLNNTGIPFFYNFS* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2325 572 Pfam Plant invertase/pectin methylesterase inhibitor 63 213 IPR006501 GO:0004857
Ahy2g2325 572 SUPERFAMILY Pectin lyase-like 258 569 IPR011050 -
Ahy2g2325 572 CDD PMEI-like_3 65 216 - -
Ahy2g2325 572 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Ahy2g2325 572 SMART PMEI_2 56 213 IPR006501 GO:0004857
Ahy2g2325 572 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 216 IPR006501 GO:0004857
Ahy2g2325 572 PANTHER PECTINESTERASE 43 571 - -
Ahy2g2325 572 Pfam Pectinesterase 260 556 IPR000070 GO:0030599|GO:0042545
Ahy2g2325 572 Gene3D - 254 571 IPR012334 -
Ahy2g2325 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 218 IPR035513 -
Ahy2g2325 572 PANTHER PECTINESTERASE 43 571 - -
Ahy2g2325 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 216 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2325 Ahy-Chr2 99438379 99445538 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2325 91 567 Carbohydrate Esterase AT4G02320 55.510 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2325 K01051 - gmx:100802881 845.114