Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2318 ATGGCTTTCAAGAAATTCTCCATTTTTATTAATCTCTTTGTATCCCATTTTCTTCCCTTCTTCTTGTTAATGACATCTTTGTCCTTAGCAGATGACCATGAATCCATTTGCCAATCAACAATAGACCCTTCTTATTGCAAAAACATGCTTGCAAATCAAAATGGCAACATATTTGACTATGGCCGTTTCTCATTCCAAAAATCAATATCCCAAACCCAAAAATTCCTAAACCAAGTTAACTCATATCTCCAAAATACACACACTTTGTCACAATACACAATTGGGGCACTCCAAGATTGCACCTTTCTTTCTCAACAAAGCTTAGAGTATTTATCAAACACCTTCACCACAATCAATCAAACTAGTAATAATACTAATAATAATCTTCTTCCATCTTCACAAGCTGAAGATTTTCAAACATTTCTTAGTGGGGTTTTGACCAACCAACAAACTTGCTTAGATGGTTTATCATTACAAACCTCTACTTCTAATTCGGATCAAGATTTGAAGAATGAACTATCTTCATCATTATCCAATGACACAAAACTCCATAGTGTTTCCCTTGCTTTGTTCACAAAAGCTTGGGTACCAAGCAAGAAAACCATAACATCATGGCCAAACAACAAGCACAACTTCAATTTCCATCATGGAAATCTACCATTGAAGATGTCCAAAAAAGCTCAAGAAATTTATGATCATGCTAAGAATTCCAAGCATGGGAGGAAATTGCTCCAAAATAATGCGAACAACGGCAGCAGCGGCGGCGATCAGAGTGTTTTGGTGAGTGATATTGTGGTTGTGAGCCAAGATGGGAGTGGAAACTTTACAAGCATAAATGATGCCATTGGTGCAGCACCAAATAATAGTGTTGCTAGTGATGGATACTTCTTTATCTATGTAACTGAAGGTGTGTATGAAGAGTATGTTTCCATTGATAAGACCAAGAAGTACCTTATGATGGTTGGTGAAGGGATTAACCGCACAATCATCACAGGTAGTCACAATGTTGTTGATAATTTCACAACATTCAATTCCGCAACATTTGCTGTGGTAGGTCAAGGGTTTGTAGCAGTAAACATAACATTCCGCAATACTGCTGGACCAAGCAAGAACCAAGCAGTTGCTTTAAGAAGTGGTTCAGATTTGTCCACCTTTTATAGTTGCAGTTTTGAAGGATACCAAGACACACTTTATACGCATTCTCTTAGACAATTTTATAGAGAGTGTGATATTTATGGTACAGTTGATTTCATATTTGGTAACGCTGCTGTGGTTTTTCAAGATTGTAACATCTATCCTCGCCTTCCAAACAAAGGACAGTTCAATACTATCACTGCACAAGGCAGAACCGATCCAAATCAAAACACAGGAACTTCGATTCAGAATGCAACCGTAAAACCTGCTGATGATTTAGCACCAAATGTTGGTAGTGTTCAAACATACCTTGGTAGGCCATGGAAGAATTATTCAGTGACAGTGTTCATGGAATCCTTCATGGATGGTTTCATAAACTCCGCAGGTTGGCATGAATGGAGTGGTGATTTTGCACTTAGTACATTGTACTATGCTGAATTCAACAACACTGGGAATGGTTCTGACACTTCTAACCGTGTTACATGGCCTGGTTATCATGTTATTAACGCTACCGATGCAGCTAATTTTACGGTTTCTAATTTCTTGAGTGGAGATAATTGGATTCCTCAAACTGGTGTTCCATATTTGAGTGGATTAAATTAA 1737 0.3771 MAFKKFSIFINLFVSHFLPFFLLMTSLSLADDHESICQSTIDPSYCKNMLANQNGNIFDYGRFSFQKSISQTQKFLNQVNSYLQNTHTLSQYTIGALQDCTFLSQQSLEYLSNTFTTINQTSNNTNNNLLPSSQAEDFQTFLSGVLTNQQTCLDGLSLQTSTSNSDQDLKNELSSSLSNDTKLHSVSLALFTKAWVPSKKTITSWPNNKHNFNFHHGNLPLKMSKKAQEIYDHAKNSKHGRKLLQNNANNGSSGGDQSVLVSDIVVVSQDGSGNFTSINDAIGAAPNNSVASDGYFFIYVTEGVYEEYVSIDKTKKYLMMVGEGINRTIITGSHNVVDNFTTFNSATFAVVGQGFVAVNITFRNTAGPSKNQAVALRSGSDLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNIYPRLPNKGQFNTITAQGRTDPNQNTGTSIQNATVKPADDLAPNVGSVQTYLGRPWKNYSVTVFMESFMDGFINSAGWHEWSGDFALSTLYYAEFNNTGNGSDTSNRVTWPGYHVINATDAANFTVSNFLSGDNWIPQTGVPYLSGLN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2318 578 CDD PMEI-like_3 35 195 - -
Ahy2g2318 578 Gene3D - 262 578 IPR012334 -
Ahy2g2318 578 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Ahy2g2318 578 Pfam Pectinesterase 265 563 IPR000070 GO:0030599|GO:0042545
Ahy2g2318 578 Pfam Plant invertase/pectin methylesterase inhibitor 34 190 IPR006501 GO:0004857
Ahy2g2318 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 194 IPR035513 -
Ahy2g2318 578 PANTHER PECTINESTERASE 23 576 - -
Ahy2g2318 578 SMART PMEI_2 28 190 IPR006501 GO:0004857
Ahy2g2318 578 SUPERFAMILY Pectin lyase-like 261 576 IPR011050 -
Ahy2g2318 578 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 23 576 - -
Ahy2g2318 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 193 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2318 Ahy-Chr2 99358986 99362170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2318 12 577 Carbohydrate Esterase AT1G02810 56.995 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2318 K01051 - gmx:100813051 802.742