Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2315 ATGTTCATGGATTCATCAGAAATCGAATCCAATTCCAAGTTATATGCCAAAAACGGCATCCTCTTCCTTACCTTCACCGTACTCCTTTTCTTCCTCCTCCTCCTCATCATTTTCCTCCACACTTTCCGACACTCATGCTTTCCTATCCGCCGCCGTAACAGCCACCGTCGTCACCACCGCCACCGACACACTGTTCCCGCCAGCAACGGTATCCACCCTTCCCTTCTTACTACCCTCCCAACCTTCACACACCCTCCTTCTTCTCCTTCCGCCGGCGGCGGCGGCGACAGCTGTGCCGTGTGCATGTCGGAGTTCGTCGCCGGCGAGGAGGGCCGGGTCCTTCCGATTTGCCGCCACGCTTTTCATTCGCAATGCATAGATGCGTGGTTCGGTTCTCACTCGAGTTGCCCGCTTTGTAGGAAACCGGTTCATCCGGTTCAAACCGGTTCGGTGGTTATTGAACCGGGTCTGGAGAAGTGGTTTCCTGAACCGATTTGGTGCCCGAAGAAGAAACCGTTGGAGATGGAGTTGGAAATGGAGAAAGTGCAGAAGATGAAGAATAGTAGTTACTGTATAAATATAATGGGTCTTTAA 594 0.5219 MFMDSSEIESNSKLYAKNGILFLTFTVLLFFLLLLIIFLHTFRHSCFPIRRRNSHRRHHRHRHTVPASNGIHPSLLTTLPTFTHPPSSPSAGGGGDSCAVCMSEFVAGEEGRVLPICRHAFHSQCIDAWFGSHSSCPLCRKPVHPVQTGSVVIEPGLEKWFPEPIWCPKKKPLEMELEMEKVQKMKNSSYCINIMGL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2315 197 SUPERFAMILY RING/U-box 95 146 - -
Ahy2g2315 197 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Ahy2g2315 197 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 10 147 - -
Ahy2g2315 197 Pfam Ring finger domain 96 140 IPR001841 -
Ahy2g2315 197 PANTHER RING-H2 FINGER PROTEIN ATL64 10 147 - -
Ahy2g2315 197 SMART ring_2 98 139 IPR001841 -
Ahy2g2315 197 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 146 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2315 Ahy-Chr2 99335786 99336660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2315 18 141 C3H Transcription Factor Family AT1G76410 44.444 6.80e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2315 - - ahf:112728565 330.872