Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2269 ATGATGAGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGCTGAAGACCATTCTGAATGTGGTTGAAGCTGTGTTGAATGATGCTGAGAAGAAGCAGATCACTGACTCTGCGGTCAAGAGGTGGCTCGAAGATCTCCAAGATGCTGTCTATGATGCTGACGACTTGTTGGATGAAGTCGCTACCAAAGCTGCTACTCAGAAGGATCCACCAGGTAACTTCTTGTCTCGCTTTCTCAATTTGCAAGATAGGGAGATGGTCACTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGTCTGGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCATCAACCTCACTGGTTAAAAAATCTGATATATTTGTTGGAAGGGACAAAGAAAGGGATGCCATAGTGAATTTGCTTTTAGATGATGCTTACAATGGTGAACTGTCCGTGATTCCCATCGTGGGCATGGGTGGGATAGGAAAAACAACTTTGGCTAAATTGGTTTATAATGATGACAAAGTGCAGCAGAAGTTTAACGTGAAGGCATGGGTTTGTGTTGGTGAGGAGGAATTTGATGTTCTTAAGGTGACAAAGATTGTGATAGAGAAAACTTGCAGTCCTTGTTACTCAAATGATTTAGATACAGCTCAAAATCATTTGAAGAATGGGCTAGCGGGGAAGAACTTCTTGGTTGTTCTGGATGATGTCTGGAGCAGTAATCGTGAGCGTTGGGAAAGTTTTCTTACACCTTTTGAATGTGGAAGTGAGGGAGGCAAGATTCTTGTAACAACACGTCTTGATACAGTTGCTTCTGTGGTGAAAACTAAACATAATGAAGCTCACAATTTAAGTTTGTTGGATGAAGAACAATGCTGGTCGGTGTTTGCAAATCGAGCATGGGGTCCTACAGAATTCCGAGATCATTCAGCTTTAGAAGAAATTGGTAGAATAATTGTTAAAAAATGTAAAGGATTACCTTTGGCAGCTCAAACAGTTGGAGGGTTATTGAGTGGGAAAGATAATGAAAAGGATTGGAATGATGTTTTAAATAGTGAATTCTGGGAACTCTCTGAGGAGGATAGTGGGATTCTTCCTGCATTGAGGATCAGTTATTATCACCTCCCATCATATTTAAAACGCTGCTTTGTTTATTGTTCTTTGTATCCTAAGGACTTTGAATTTGATAGAGATGAATTGACATTATTGTGGATGGCAGAAGGTCTTTTGCTAGAACCAAAGAGTGGAAACACTTTGGAAGAAATTGGTTATGAATATTTTGATGATTTGGTTTCGAGATCATTTTTTCAACATTCTAACTCTGCTAAAAATTCATTTGTAATGCACGATCTCATGCATGATTTAGCAAAGTTCTATGCTGGAAAGTTCTTTTCTAGTATCCTTGAACTCAAGAATGCAGCAAAGCATGATACGAAAACTCGCCACTAG 1470 0.3952 MMRGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDSAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLNLQDREMVTRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDKERDAIVNLLLDDAYNGELSVIPIVGMGGIGKTTLAKLVYNDDKVQQKFNVKAWVCVGEEEFDVLKVTKIVIEKTCSPCYSNDLDTAQNHLKNGLAGKNFLVVLDDVWSSNRERWESFLTPFECGSEGGKILVTTRLDTVASVVKTKHNEAHNLSLLDEEQCWSVFANRAWGPTEFRDHSALEEIGRIIVKKCKGLPLAAQTVGGLLSGKDNEKDWNDVLNSEFWELSEEDSGILPALRISYYHLPSYLKRCFVYCSLYPKDFEFDRDELTLLWMAEGLLLEPKSGNTLEEIGYEYFDDLVSRSFFQHSNSAKNSFVMHDLMHDLAKFYAGKFFSSILELKNAAKHDTKTRH* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2269 489 Gene3D - 4 105 - -
Ahy2g2269 489 CDD RX-CC_like 12 102 IPR038005 -
Ahy2g2269 489 PRINTS Disease resistance protein signature 231 245 - -
Ahy2g2269 489 PRINTS Disease resistance protein signature 330 344 - -
Ahy2g2269 489 PRINTS Disease resistance protein signature 158 173 - -
Ahy2g2269 489 Pfam Rx N-terminal domain 9 73 IPR041118 -
Ahy2g2269 489 PANTHER DISEASE RESISTANCE PROTEIN RP 6 473 IPR044974 GO:0006952
Ahy2g2269 489 Pfam NB-ARC domain 139 358 IPR002182 GO:0043531
Ahy2g2269 489 Coils Coil 12 32 - -
Ahy2g2269 489 Gene3D - 378 465 IPR036388 -
Ahy2g2269 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 393 IPR027417 -
Ahy2g2269 489 Gene3D - 293 377 IPR042197 -
Ahy2g2269 489 Gene3D - 111 288 IPR027417 -
Ahy2g2269 489 PANTHER OS05G0414200 PROTEIN 6 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2269 Ahy-Chr2 98930190 98931659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2269 155 464 WRKY Transcription Factor Family AT5G45050 24.847 2.41e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2269 - - aip:107626153 845.114