Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2262 ATGAAGTTCTGCAAAACCTACCAAAAGTACATGCAAGGGCAAGAGGAGAAGCTACCTGGACTTGAATTCAAAAATCACAAAAAGATTATGAAGAAATGTAGAAGTGGAGGTTGTTATTCTCCTATCATGATGAACCATAATAATAATAATAATAACAATAATGCCACCAAAAGTTGCCCTATTCAATGCCCAGTTTGTGATGGAACTTTCTTCCCTTCTCTGCTGAATGAAGTATCAGAAGTAGTAGGGTGCTTCAACAAGCGTGCACAACATTTGCTAGAGTTACACCTCTCTTCAAATTCTGGCTTCAAGAAGTACCTTCTTTGCTTGACAAGATCCAATCATAATACTATCATTCAACAAGGCAAAGATCTTGTCACTTATGCACTCATCAATGCTGTCGCTATCCGAAAAATATTAAAGAAATATGATAAGATACATGACTCAAAGCAAGGGCAATTATTCAAGTCACAAGTGCAGGCTATGCACAAGGAAATTCTTCAGAGTCCATGGCTTATTGAGGTTATGGCCTTATACATCAACACTAACACTAAAGACCCTACATCTTCTTTGTTTGATGGATGCTGCCTCACTTTTAAGGATGGAAAACCATCACTCACTTGTGAAATCTTTAAACCCTACAAAGTTGATATTGACTTGACTTGTTCTATATGCTTGGATACAGTGTTTGATCCTGTGGCGTTGACTTGTGGCCATGTTTTCTGTTACACATGTGCTTGCTCAGCTGCATCAGTAACCATTGTTGATGGACTTAAGGCAGCAGATCCTAAACAAAAGTGTCCTCTATGCCGCGAGAAAGGAGTTCATGAAGGTGCTGTGCACTTGGAAGAACTAAATATTTTGTTAGGCCAAAGATGCAAGGAATATTGGGAGGAAAGACTTAGAATGGAGAGGGTAGAAAGGGTTAGGCAGGCCAAGGAGCACTGGGAATCTGTCTGTAGAACAGCCATGGGAATCTAA 981 0.3965 MKFCKTYQKYMQGQEEKLPGLEFKNHKKIMKKCRSGGCYSPIMMNHNNNNNNNNATKSCPIQCPVCDGTFFPSLLNEVSEVVGCFNKRAQHLLELHLSSNSGFKKYLLCLTRSNHNTIIQQGKDLVTYALINAVAIRKILKKYDKIHDSKQGQLFKSQVQAMHKEILQSPWLIEVMALYINTNTKDPTSSLFDGCCLTFKDGKPSLTCEIFKPYKVDIDLTCSICLDTVFDPVALTCGHVFCYTCACSAASVTIVDGLKAADPKQKCPLCREKGVHEGAVHLEELNILLGQRCKEYWEERLRMERVERVRQAKEHWESVCRTAMGI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2262 326 SMART ring_2 222 270 IPR001841 -
Ahy2g2262 326 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Ahy2g2262 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 324 IPR013083 -
Ahy2g2262 326 ProSiteProfiles SPX domain profile. 1 157 IPR004331 -
Ahy2g2262 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 326 - -
Ahy2g2262 326 Pfam Zinc finger, C3HC4 type (RING finger) 219 273 - -
Ahy2g2262 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 326 IPR033326 -
Ahy2g2262 326 ProSiteProfiles Zinc finger RING-type profile. 222 271 IPR001841 -
Ahy2g2262 326 SUPERFAMILY RING/U-box 215 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2262 Ahy-Chr2 98871025 98874372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2262 219 271 C3H Transcription Factor Family AT4G28270 41.379 1.14e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2262 K16275 - gmx:100787904 461.84