Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2249 ATGGCAACAAATAGATTCATATGTGAGATATGCAACAAAGGGTTTCAGAGGGACCAAAACCTTCAGTTACATAGGAGAGGTCACAATCTACCATGGAAGCTAAGGCAAAGAGCAACAACAGAAGAGGCGATGAAGAAGAGGGTGTACGTGTGCCCCGAAAAATCGTGTGTGCACCATAACCCTGCCCGAGCACTGGGGGACCTCACTGGGATAAAGAAACATTACAGCAGGAAACATGGTGAGAAGAAGTGGAAATGTGACAAGTGTTCAAAGAAATATGCTGTTCAATCTGATTGGAAGGCTCATCAGAAAACATGTGGCACTAGAGAATATAAATGTGATTGTGGAACTATATTCTCCAGAAGGGACAGCTTCATAACACACAGGGCCTTTTGTGATGCATTAACTGAGGAAAACAACAGAATAAATCAACAAGGATTAACAAATGGGGTGCCACAAAACTTGCAAAATGAACAAGTCTCTGATCTTATAGCCACAATGCCCCTAAGCAACAGTAATGCATCAGAACTCAACAGCAATAACCATAACAATCCACTTAGAACACTCTCACAAGAGATTGTACCAGTGCCATTCAAGTCCATGAGCATTGGTGGGGGCATTTTCTCCCCAACAAGTTCATCATCAGGTACACTATTTGGTGGTCCAAAGAGCATGCACCCTCTTCCTACCTCTTCTTCAAGCCTTCAACTCAGTTCCAACAACTCCACTGGTTTCAATTACTTCCAAGATAGCAGCAAGAACTTGGGTCTTGTTTCCAGCTCAGCTCACATGTCTGCAACTGCACTATTGCAGAAAGCAGCACAAATGGGTGCTGCTGCAAGCAGCAACAGCATTAACTCCCCCATGATGCAAAAACCCTTTGTTACTACCATGGCCGGTCCTGACCAAGTTTCTGGTGCTGCTACGGCTATGCAGCACCATAACCGTAATAACCCTCCTTCCTATGATCATCACTTCAATCCACAGGCTGATCAATTTTTTCATAAAAGGCAGCAAGAAATGCCACTGATATTTGAAGCTAATAACAATAGTAATGATGGGTCAACAACAAATAATGATATAGGAATGCTTAGCACAATGTTCATGGGAAGTGATCACAATACACAAGAGGTTGGTGCTACTAGTTTGGTCCATGAAAGAGACCTTGCAGAAGGAAATAACCAAATGGGGGCACCAAGGTTTGGTGTCAGTAATGACATGAAAACAGTTCATGATTTCTTGGGAGTTGGAGGGTCAACTTCAAGAGCTACAGGGAATTTGCATGAACCTCAGAGACATCATCATCATCAACAAGAACAACAGAGATTGGAATTAGAAGCATTAAGCCAACAGAGGTTACCACTTATTAATCACTTTCAGCATCACATTCCACATGGAGATTCAACTATGGAGAAATCTGTTTGGGACATATGA 1434 0.4254 MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRATTEEAMKKRVYVCPEKSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRINQQGLTNGVPQNLQNEQVSDLIATMPLSNSNASELNSNNHNNPLRTLSQEIVPVPFKSMSIGGGIFSPTSSSSGTLFGGPKSMHPLPTSSSSLQLSSNNSTGFNYFQDSSKNLGLVSSSAHMSATALLQKAAQMGAAASSNSINSPMMQKPFVTTMAGPDQVSGAATAMQHHNRNNPPSYDHHFNPQADQFFHKRQQEMPLIFEANNNSNDGSTTNNDIGMLSTMFMGSDHNTQEVGATSLVHERDLAEGNNQMGAPRFGVSNDMKTVHDFLGVGGSTSRATGNLHEPQRHHHHQQEQQRLELEALSQQRLPLINHFQHHIPHGDSTMEKSVWDI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2249 477 SUPERFAMILY beta-beta-alpha zinc fingers 5 105 IPR036236 -
Ahy2g2249 477 SMART c2h2final6 84 104 IPR013087 -
Ahy2g2249 477 SMART c2h2final6 49 79 IPR013087 -
Ahy2g2249 477 SMART c2h2final6 6 28 IPR013087 -
Ahy2g2249 477 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 440 - -
Ahy2g2249 477 MobiDBLite consensus disorder prediction 214 236 - -
Ahy2g2249 477 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 440 - -
Ahy2g2249 477 Pfam Zinc-finger double-stranded RNA-binding 6 28 IPR022755 -
Ahy2g2249 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Ahy2g2249 477 MobiDBLite consensus disorder prediction 417 439 - -
Ahy2g2249 477 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Ahy2g2249 477 Gene3D Classic Zinc Finger 62 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2249 Ahy-Chr2 98549887 98553129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2249 1 285 IDZ Gene Family AT3G50700 52.751 2.28e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy2g2249 zf-C2H2_jaz 6.90E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2249 - - ahf:112730641 904.82