Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2215 ATGAAGGAAAAAGTGGATTCACCAGTTACAGTTCTTGAGGACTATTTCAGGTCCTCAGATTCATCAGAAACAAGTTGTTCAAAAGATCATGATCATAGTTGTTTGGATTCTGAGTCTCAAGAAATTTCAAGGCCAAGTTGTTCAAGGTGGCATTCATTTGTTCAAATTTTGAAGGGAAAATCATCATCCAAGAACAACACATTGTTGCACCCTTTGAACATATCAAGAAGAATGAGTAGTAGCATGAGAGAATCTCTATGGCCAAGTTGCCTCTTAGATGTTGCAAGCCCTTCACCTTGTAGGTCACCTTGGAAGATCTTCTCTCACCATGATATTCAACTAGCAACCAATCATTTCAGCCAAGAAAACTTGATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATAATCAGCTTGTAGCAATTAAGAGGCTAACAAGAGGAACTGCTGATGAGATCATAGGTGACTTTTTATCAGAACTTGGAGTTATGGCACATGTCAATCACCCCAACACTGCTAAGCTTGTTGGTTATGGTGTGGATGGTGGAATGCACCTTGTTCTTGAATTGTCTGAGAAAGGGAGCTTAGCTTCACTGCTTTATGGTTCCAAGGAGAAATTAGCATGGTGCATCAGGCAAAAAATTGCAGTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATTCATAGAGATATAAAAGCTGCAAATATATTGCTCACTGAGGACTATGAGCCTCAGATATGTGACTTTGGGCTAGCAAAATGGCTACCGGAGAATTGGACTCACCACACTGTTTCAAAATTTGAAGGAACTTTTGGGTACCTTGCACCTGAGTACTTGCTTCATGGAATTGTTGATGAGAAAACAGATGTATTTGCTTTTGGTGTGCTTCTATTAGAATTGGTCAGTGGAAGGCGTGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCATTGCTGAGAAAGAATGAAATTAAGGAGCTGATTGATCCATCACTAGATGAAGAATTTGACACAAGGGAGTTGAATCTCATGTTATTGGCAGCTTCTTTGTGCATTCAACAATCTTCAATTCGTCGCCCCTCTATCAGACAGGTTGTTCAACTTTTAAATGGAAATCTCAGCTGCTTTAAGGGCGTGAAGAAAACTAGATTTCCATTCTTCAGAAAAGTCTTCCAAGAAGAACTCCTTGATTCTGAATAA 1245 0.3928 MKEKVDSPVTVLEDYFRSSDSSETSCSKDHDHSCLDSESQEISRPSCSRWHSFVQILKGKSSSKNNTLLHPLNISRRMSSSMRESLWPSCLLDVASPSPCRSPWKIFSHHDIQLATNHFSQENLIGKGGYAEVYKGCLPNNQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMHLVLELSEKGSLASLLYGSKEKLAWCIRQKIAVGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLRKNEIKELIDPSLDEEFDTRELNLMLLAASLCIQQSSIRRPSIRQVVQLLNGNLSCFKGVKKTRFPFFRKVFQEELLDSE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2215 414 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Ahy2g2215 414 Gene3D Phosphorylase Kinase; domain 1 93 193 - -
Ahy2g2215 414 ProSiteProfiles Protein kinase domain profile. 119 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2215 414 SMART serkin_6 119 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2215 414 Pfam Protein kinase domain 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2215 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Ahy2g2215 414 Gene3D Transferase(Phosphotransferase) domain 1 196 396 - -
Ahy2g2215 414 SUPERFAMILY Protein kinase-like (PK-like) 96 384 IPR011009 -
Ahy2g2215 414 PANTHER OS08G0249100 PROTEIN 1 413 - -
Ahy2g2215 414 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2215 Ahy-Chr2 98044195 98048532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2215 106 380 Trihelix Transcription Factor Family AT1G68690 41.608 1.54e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy2g2215 Pkinase 1.40E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2215 - - gmx:100780587 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2552 12 114742050 114748046 Ahy2g2215 2 98044195 98048532 hybridization
Ahy16g0288 16 6266527 6268338 Ahy2g2215 2 98044195 98048532 PCT
Ahy6g1036 6 13762641 13765221 Ahy2g2215 2 98044195 98048532 PCT
Ahy2g2215 2 98044195 98048532 Ahy16g0288 16 6266527 6268338 PCT
Ahy2g2215 2 98044195 98048532 Ahy6g1036 6 13762641 13765221 PCT