Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy2g2209 | ATGGATAAAGCGGTTGATTCCAGTGGTGAGAATAAGCAGGATCAAGGGTGTAAGAACAAGCGAAAATCGGTTCATCCTTCCGTAGCTGTTGCCAGTGCCCCCACATCTTTGATTGAGTTCCCTCGGTATGAATTACCGTCGGAGCTTCCACAAAGCTTAAATGGTACTAATCCATCTGAGGTAGTATCAGATTGGTATAGAGTAGAATCAGAAATGCGTATGAACGAGCTTGTGGATTGGAATGATCCTATTGCAAACCAGCTTGAGGAATTACTGTTGTCTAATTTGCAAGCTGTTTTTCATGCTGCAATCAAGCAGATTGTTGAATTAGGATATGGTGAAGAGGTGGCTCACATGTCCATTTCAAGGAGAGCCTTATACATAGAGGAAGGAGACCCTGTCTCAAATATTGTACAGGATACAGTGAATATTCTTAAGGGAAAAGATGTTGCTGGTTCGGATGTCGTGTTTGAAAATTTTCAGCATTTGCTGTACTACACCATGTTGGAGATGATCAGTGTACTTCGCGAAGTTAGACCGTCCTTAACATCTGGCGAAGCAATGTGGCTTTTGTTGATGTGTGACTTGAACATCTCACTAGCCTGTTCAGCAGAAGATCGCCCGAGTGGTGTTGTTCAGAATGGGGAAAGCTCTTCTGGTTCTTCTGTTCCCCAGTCAAAGCCAGAGGTTCAAATCTCTGAATCTGACATAATTATTGAGCCAACTGTCCCAAAGGAATTGCCCCATAGTCACCAGAACAAGTCTGAAGCACCTAAGTTCGGAAGTTTCCAGAATACCCCGAACAGTCAAAGTCTTCTTGTTTCAGAAGGGGGAAAGCTTCATAAGGGGAATGCTTCTTTGCTGGTCACTACAGAGAAATCCACAGGAACTTCAGTGGGTCCTGCTAAGGAATCTAAACCCGGGTCTAGTTCCAAGCGCCATAACAGAAAAGAAATAGTAGCACTTAGGCAGAAGTTCCTTCATATGGAGAAAGCTTACAGGGCTTGTGGAAAAGGTGGTTTTAAATCAGGGAAGCTTACAAGTGTAAGTAGTTTGGTTGTTGAAAAAAGAATCAAGCAACCATCTGAAATTCCTAATCAGCAAATGAAGTGTGGTTCCTCAAATTCAACAAGCACAAAAGGAGTTCACTCAGCTGATGCAGCATGCTGTGTTTCGACCAATAGTTCCTCTACTTCAAATGGAAGAGGTAACACCGGAACATTACCTACAAAGGATGCAACATCTGCTTCTACTGTAGTCAATTCTACTACAGTGTCAGACACTACATCCAAGCCTAAGTCTGAACCTAGTTCCACTGACAATCAAAAGATTCTTGATTTCTGTGCCGGTATTCCTTATGATGAGTCTTTGGGTAAGTATGTGCCAAGAGATGAAAAGGATGAACTAACTTTGATGTTAATAGCTCGCGTGCAAGAATTGCAGTTTGGGATGCAAAGCTGGAACAACTGGACAAAACAAAAAGTTATGCAAGTTACTGAGAGGCTCGGAAAAGTGCAGAGTGAGCTTAAAGCTCTTAGGAAGGAGAAGCAAGAAGCCGACCTATATAAAAAAGATCAGAAACTTTTGGAGGAGAATGCAGTGAAGAGAATCTCTGAGATGGAGAATGCCATGGAGAATACTAGAAAGCAAATTGAGCATGCTACTTCTGCTGCAGTTGAGCTAGAGGCAGAGAACGCTTCGCTGAAGAAGGAATTGGATGATGCGAAGTTGTGGGTTCTAAAGTCGATGACAAGCCATCGACAAGCACTTGAGAGAGAGCAGATTGTTCTTAAACAGCTTCAATCATGGGAGAGCCAAAATGGTTTACTTCGAGATGAGCTTGATGGAGAGAAGCACAGTTTATCTAACCTACTACAAGTGCTACACAAGGAGAAAAATCTTCTAGCCAACATTGAGGGTAGACTGGAACAAGAGAGAGCTGTGAAAGAAAAGCTCCTTGCACAGGCAGCATCCATTAGAAAGGAAAGACAACAACTCGAAGCGCACATCAAATCTGAAGAGGATACTATTAGAAAAAGGGCAGCTAATGATATGCAGAAATATGTGGATGATATTGCAAGGCTTGAGAAAGAGTTGATTGAGTTAAAAATAAAATCCGAGTCTGAACAAATAGCAGCTCTTCGCAGGGGTGTTGATGGTAAAAATGACAAGTTCTCCAGAACCAGCAAAAATACTCTTACGGTGAAGGAGAACAAGAAATCTAATGCGTCCCAAACGATGGTTAGCAATCGAGATAAAATGTCTACCGGAAGCTTGAGGCGAGAGCAGGAGTGTGTCATGTGCCTATCAGACGAGATGTCAGTGGTGTTTCTGCCGTGCGCACACCAGGTTGTTTGTCAAGACTGCAACGAACTCCACGAGAAGCAAGGGATGAAGGATTGCCCTTCATGTAGGACCCCAATCCAACGGAGGATTCATGCAAGATTTGCCGGACATTCGAGGGCGTAG | 2469 | 0.4318 | MDKAVDSSGENKQDQGCKNKRKSVHPSVAVASAPTSLIEFPRYELPSELPQSLNGTNPSEVVSDWYRVESEMRMNELVDWNDPIANQLEELLLSNLQAVFHAAIKQIVELGYGEEVAHMSISRRALYIEEGDPVSNIVQDTVNILKGKDVAGSDVVFENFQHLLYYTMLEMISVLREVRPSLTSGEAMWLLLMCDLNISLACSAEDRPSGVVQNGESSSGSSVPQSKPEVQISESDIIIEPTVPKELPHSHQNKSEAPKFGSFQNTPNSQSLLVSEGGKLHKGNASLLVTTEKSTGTSVGPAKESKPGSSSKRHNRKEIVALRQKFLHMEKAYRACGKGGFKSGKLTSVSSLVVEKRIKQPSEIPNQQMKCGSSNSTSTKGVHSADAACCVSTNSSSTSNGRGNTGTLPTKDATSASTVVNSTTVSDTTSKPKSEPSSTDNQKILDFCAGIPYDESLGKYVPRDEKDELTLMLIARVQELQFGMQSWNNWTKQKVMQVTERLGKVQSELKALRKEKQEADLYKKDQKLLEENAVKRISEMENAMENTRKQIEHATSAAVELEAENASLKKELDDAKLWVLKSMTSHRQALEREQIVLKQLQSWESQNGLLRDELDGEKHSLSNLLQVLHKEKNLLANIEGRLEQERAVKEKLLAQAASIRKERQQLEAHIKSEEDTIRKRAANDMQKYVDDIARLEKELIELKIKSESEQIAALRRGVDGKNDKFSRTSKNTLTVKENKKSNASQTMVSNRDKMSTGSLRREQECVMCLSDEMSVVFLPCAHQVVCQDCNELHEKQGMKDCPSCRTPIQRRIHARFAGHSRA* | 823 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy2g2209 | 822 | ProSiteProfiles | Zinc finger RING-type profile. | 765 | 805 | IPR001841 | - | |
Ahy2g2209 | 822 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RF298-RELATED | 4 | 817 | - | - | |
Ahy2g2209 | 822 | SUPERFAMILY | RING/U-box | 759 | 811 | - | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 289 | 317 | - | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 289 | 305 | - | - | |
Ahy2g2209 | 822 | Pfam | Family of unknown function (DUF6592) | 95 | 204 | IPR046527 | - | |
Ahy2g2209 | 822 | Coils | Coil | 678 | 712 | - | - | |
Ahy2g2209 | 822 | Coils | Coil | 495 | 578 | - | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 393 | 441 | - | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Ahy2g2209 | 822 | Pfam | Zinc finger, C3HC4 type (RING finger) | 762 | 810 | - | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 255 | 274 | - | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 208 | 274 | - | - | |
Ahy2g2209 | 822 | PANTHER | OS05G0141500 PROTEIN | 4 | 817 | IPR046934 | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Ahy2g2209 | 822 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 737 | 815 | IPR013083 | - | |
Ahy2g2209 | 822 | MobiDBLite | consensus disorder prediction | 210 | 232 | - | - | |
Ahy2g2209 | 822 | Coils | Coil | 628 | 676 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy2g2209 | Ahy-Chr2 | 97963779 | 97968363 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy2g2209 | 765 | 812 | C3H Transcription Factor Family | AT1G73950 | 41.667 | 8.48e-06 | 47.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy2g2209 | - | - | gmx:100793172 | 1018.84 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy12g2548 | 12 | 114615793 | 114620340 | Ahy2g2209 | 2 | 97963779 | 97968363 | hybridization |