Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2186 ATGGATTATGGTAATAAGTACACTATTCCAATACCTGGAATCAAAGTTTTGGTGGTGGATTGTGATTCAACATCTCTAACATTGGCATCTAAAATGCTTCGTATCCTTGGATATGAAGTTGTGACTGCTAAACTAGGTTCTGATGCTTTACCAATTATTGAGAAGAATGAGCTTCACCTTGTGCTCATGGAGATTCATTTGCCTGACATGAAAATGTTTGAACTCATTGACAAAATCAGAGAAAGCTATGACATCCCATCTTTCATTATGAGTGCTGATGAAAATCAAACTTCAAAGTCAAAAGCACTAAGCAAAGGAGCTAAACTCTATTTCATAAAGCCACTTCTACTTTCTGATTTAAAGGGCCTCTGGAAATTTGCATCATGCAACACAAAAGTTTCAACAGTATCCACTGATCAAAATGGATCAAAGGGTATCACAGTGAACAAGGATCAAGAATGCAAACCACTGAATAATAATAATAACAAAGAGAAAAAACAAGAACTTGTTGAATCATCAGTGGTCCAGAGAAGGAAAAGAATTAGGTGGACTGATCATTTGCATATGAAGTTCATGGAAGCTGTTATCTTAGCAGGATCTGGTGCTGGTCCTAAGAAAATACATGAGTATATGAATGTGTCAGGAGTCACAAAAGAGCATGTTTCAAGCTATTTACAGAAATATCGCCAATCTTTGAAAGCGCAAGATAGTGAAATTCAATATCAAAGGAAAATGCTATCATCTGAGTTGAATTTAAGATCATACCAATTGAAGGATCTCTTCCATTGCAAGTCAGAGCAATTTCTTGATGCTCCTGCACATCTTCCTTCCACAAAAATTCCAACTGTTCATGAACCAGCTTTGAGCCAAAACCAATTACTCCCAGGGACACTGGTGCAAGGTGAGATGAATGGCAATGGTGTGGAATCTGTGGAGATTAGCCAAGAAGAAAGTTATACTAATGGAAGAGTTTCTGAAGAAGATCAATTAGACCCAAGTGAAGATTTTGAAACAATAATGACAAATACTGAGCCTTGTTTCACTAGCTGGAGTCGGCTACTTGATCCTGAAGAAACTTCTTACGAGGTTTCCTCTAAGGATTATACTGCTGAAAACAGTGAATTGAATTGTTCGATGCCGATGGAGAATGATATGTGTCAACAGTTTCCTGCATTTCCTTCAGTACCATCAGGAAATGTTGATGAGATCTTCAATATTTCAAAGGAAACTGAGAATGCCTGTGATGAGGATTTAGATAGTTGGCTAAAAAGCTTATAG 1278 0.3725 MDYGNKYTIPIPGIKVLVVDCDSTSLTLASKMLRILGYEVVTAKLGSDALPIIEKNELHLVLMEIHLPDMKMFELIDKIRESYDIPSFIMSADENQTSKSKALSKGAKLYFIKPLLLSDLKGLWKFASCNTKVSTVSTDQNGSKGITVNKDQECKPLNNNNNKEKKQELVESSVVQRRKRIRWTDHLHMKFMEAVILAGSGAGPKKIHEYMNVSGVTKEHVSSYLQKYRQSLKAQDSEIQYQRKMLSSELNLRSYQLKDLFHCKSEQFLDAPAHLPSTKIPTVHEPALSQNQLLPGTLVQGEMNGNGVESVEISQEESYTNGRVSEEDQLDPSEDFETIMTNTEPCFTSWSRLLDPEETSYEVSSKDYTAENSELNCSMPMENDMCQQFPAFPSVPSGNVDEIFNISKETENACDEDLDSWLKSL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2186 425 MobiDBLite consensus disorder prediction 151 171 - -
Ahy2g2186 425 MobiDBLite consensus disorder prediction 157 171 - -
Ahy2g2186 425 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 13 347 - -
Ahy2g2186 425 Gene3D - 174 234 - -
Ahy2g2186 425 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 179 230 IPR006447 GO:0003677
Ahy2g2186 425 Pfam Response regulator receiver domain 16 120 IPR001789 GO:0000160
Ahy2g2186 425 Gene3D - 11 132 - -
Ahy2g2186 425 ProSiteProfiles Response regulatory domain profile. 15 128 IPR001789 GO:0000160
Ahy2g2186 425 SUPERFAMILY Homeodomain-like 176 233 IPR009057 -
Ahy2g2186 425 SMART REC_2 14 124 IPR001789 GO:0000160
Ahy2g2186 425 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 347 IPR045279 GO:0009736
Ahy2g2186 425 SUPERFAMILY CheY-like 12 126 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2186 Ahy-Chr2 97603420 97607082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2186 13 264 Response Regulator Gene Family AT2G25180 31.250 5.32e-31 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy2g2186 Response_reg 4.80E-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2186 - - ahf:112728429 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2523 12 114171913 114175582 Ahy2g2186 2 97603420 97607082 hybridization