Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2182 ATGGCAGGGGATGAAGCTATTAAACATGCTTCTACAACCACCACCACCACTACTCCTATGTCCAAATCAAACAAATCAACCATGAAAAGGTTCATTGGTGTGAGGCAGAGGCCTTCAGGAAGATGGGTGGCTGAGATCAAAGACTCATCACAACATGTGAGATTATGGCTTGGGACCTATGACACACCAGAGGAGGCAGCAAGGGCCTATGACGAAGCGGCACGTGTCCTACGAGGCGAAAATGCAAGAACAAACTTTGCATTATTAGATTCTGATACCGATGGAAGTTCTAGTAAATTGTTATCCGAGTCTGACAGAAAAAGTAGACTGAGTTTCCCTTCGTTAAAAGCGAAACTCAGTAAGAATCTTCAAAACATTATAGCAAGAACAAGCGATAATAACAATAACAGTATGAAATCTTCGTCGGCAAAGAGTAGGGTGAGTGATCATTTCACTTTTGCTAGCATATTCAAAAGAAGAAATTGTTACCAGCAATACCCTCATCAAATGCCTAGTCCAATTGATATGAAGAACATTGATAAAGTTGTGCAACCTAGTATCATTGTTCCCCCTTTGGAAAATGATCATAACCACAACAATAATGATAATGGTTCTTCAACATCATGGGAAAATTCTAGTGTTTCTGATTACAGCAGCTGTGATTGGTTTGGATCAGATTTTGGAGATTTCAGTGTTGGTGATCAAGGGTATTTGGATCAATTGTTGGGGTGGGTTGAAAGTTCAAATCTTTGTTCAAATGGGGTTGGTGATTTTGATGATGAGAGTTCAAGGAGTAAGAGGTTTAAGGTGTCTTCTACAGTGCTTGTTCCTCCTACTTTCACTTCTTCATCACATGATTATTGTGGTTCACCTTATGATTATTATAATTATAATACTAATAATGGATGTGGCTCTCCATGTAGTGGTTATGCCTCTCCATATAATGGTAGGAAGTAA 957 0.3918 MAGDEAIKHASTTTTTTTPMSKSNKSTMKRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARVLRGENARTNFALLDSDTDGSSSKLLSESDRKSRLSFPSLKAKLSKNLQNIIARTSDNNNNSMKSSSAKSRVSDHFTFASIFKRRNCYQQYPHQMPSPIDMKNIDKVVQPSIIVPPLENDHNHNNNDNGSSTSWENSSVSDYSSCDWFGSDFGDFSVGDQGYLDQLLGWVESSNLCSNGVGDFDDESSRSKRFKVSSTVLVPPTFTSSSHDYCGSPYDYYNYNTNNGCGSPCSGYASPYNGRK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2182 318 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Ahy2g2182 318 MobiDBLite consensus disorder prediction 1 28 - -
Ahy2g2182 318 CDD AP2 29 87 IPR001471 GO:0003700|GO:0006355
Ahy2g2182 318 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 256 - -
Ahy2g2182 318 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Ahy2g2182 318 MobiDBLite consensus disorder prediction 193 210 - -
Ahy2g2182 318 MobiDBLite consensus disorder prediction 190 210 - -
Ahy2g2182 318 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Ahy2g2182 318 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 256 - -
Ahy2g2182 318 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Ahy2g2182 318 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Ahy2g2182 318 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Ahy2g2182 318 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Ahy2g2182 318 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2182 Ahy-Chr2 97579682 97580638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2182 7 87 AP2-EREBP Transcription Factor Family AT5G19790 61.728 1.26e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy2g2182 AP2 3.90E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2182 K09286 - gmx:100799444 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2519 12 114127647 114128603 Ahy2g2182 2 97579682 97580638 hybridization