Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2153 ATGACGATGATTCCATGGGGTGGAATCAGTTGCTGTTTGAGTGCAGCTGCTCTATACCTCCTTGGCAGAAGCAGTGGCAGGGATGCTGAGCTTCTTAAATCTGTAACAAGGGTCAATCAATTGAAGGAGCTGGCACAACTGTTAGATGCGGAAATCTTACCCTTGGTTGTTAGCATTTCTGGGAGAGTCAGCTCTGAAACCCCAATTCACTGTGAGTTCAGTGGTTTAAGAGGAGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCATGGATACAAGATTCTGCTTTAATGCTATCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGAAGTGACCGCGTGCATGTGGTAGGAGCCCGTGGTGCCACAGGATTTGTATTACCTGTTGCAAGTGAGGCGTTTGAAGAGTCCGGTAGGTCACTTGTACGTGGTACATTGGATTATCTCCAAGGTCTCAAGATGCTTGGGGTCAAGAGAATCGAACGGGTACTTCCAGTTGGGACTTCCTTGACTGTCGTTGGTGAGGCTGCTAAAGATGACATTGGGACTATTCGAATTCAGCGACCCCACAAAGGGCCATTTTATGTCTCTCCCAAAACACTTGATCAGCTCATCGCAAATCTGGGGAAATGGGCAAGATGGTATAAATATGCGTCTATGGGCTTGACACTATTTGGTGCTTACCTAATAGCTAAGCATGCTATTCGGTTCATCTTGGAAAGACGGCGTCGTTGTGAACTGCAAAAAAGGGTTCTTGCGGCCGCTGCTAAGAGACAAGGACAAGATAATGAAGGTGAAAAAGCTGACACCTCACTAGACGGCACGAAAAGGGACCGTTCAATGCCAGACTTGTGTGTAATATGCCTGGAGCACGAATATAATGCTGTCTTCGTACCATGTGGGCATATGTGCTGCTGTACTACCTGTTCTTCACACTTAAACAATTGTCCTCTTTGCCGGCGGCGGATCGAACAAGTAGTGAAGACTTTTCGTCATTGA 1026 0.46 MTMIPWGGISCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLDAEILPLVVSISGRVSSETPIHCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGSDRVHVVGARGATGFVLPVASEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTLDQLIANLGKWARWYKYASMGLTLFGAYLIAKHAIRFILERRRRCELQKRVLAAAAKRQGQDNEGEKADTSLDGTKRDRSMPDLCVICLEHEYNAVFVPCGHMCCCTTCSSHLNNCPLCRRRIEQVVKTFRH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2153 341 SUPERFAMILY RING/U-box 293 335 - -
Ahy2g2153 341 Pfam E3 Ubiquitin ligase 87 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Ahy2g2153 341 Pfam Zinc finger, C3HC4 type (RING finger) 292 335 - -
Ahy2g2153 341 CDD RING-HC_LRSAM1 293 332 - -
Ahy2g2153 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 340 IPR013083 -
Ahy2g2153 341 ProSiteProfiles Zinc finger RING-type profile. 294 329 IPR001841 -
Ahy2g2153 341 PANTHER - 3 308 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2153 Ahy-Chr2 97165544 97169921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2153 3 274 C3H Transcription Factor Family AT1G63900 77.737 1.22e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2153 K15688 - gmx:100800734 625.55