Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2142 ATGGCATATTCTCCTTTCTCTAGTTCATCTGCTTTCAATGTTCCTCTAATCAAACATGATGTCTTCGTCAGTTTTCGAGGAATAGACATTCGCACTTCTTTTCTTAGTCATTTGACGAAAGACTTGCATCGTAATCAAATTGATTTCTTTGTTGACGATAAAAAGCTTCATCCGGGAGATGAGATTTCACCCACCCTCCTTCGAGCAATTGAGCAATCATACATTTCATTGGTCATCTTCTCCAAACACTATGCTTCTTCGAGATGGTGTATGGAAGAGCTTGTGAAGATTATTGAATGCATGGAACAATATAAAAGGATTGTGATACCTGTTTTTTATAATGTTGATCCTTCTCATGTAAGGCATCAAAAAGGAATTTTGGCAGAAGCTTTTGATGTCCACAAAGAGAGATATGAAGAGGAAATTATGCAGAGTTGGAAATCTGTTTTGAAAAAGACGGCAAATTTATCTGGAATTCATTATCCATCGAAATATCGAAATGAATCAGAACTAATCGAAGATATTGTCAAGAATATTTCGGAGAAATTGTCGCATCTTTTGTCAAATGCATCCGAAAGCCTTATTGGAATTGATGAAAAATTAAACTCTCTTGAACGTCTAATGGAAATGGACCCTGAAGAAGTTCGAATTTTGGGAATTTGGGGCATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTCGACAGATGTGCCTCTCGATATGAAGGTTGTTGCTTTCTACAAAATGTAAGAGAAGAATTACAAAAGTCTGGTGAACACAGCTTATATGAGAAACTTATTTCTGAACTACTTGAGGGAGAACATCTCCTTGTAAAGGGATCAGCCCATGCAAGATCTATGTATGTTAAGAGAAGGTTGAGTCGGAAGAAGGTCTTCATAGTGCTTGACGATGTGGATACATTAGATATATTAGATTATCTAATTATAAAACAAATCTGTTTGGCACCAGGAAGTAGGGTCATTATAACAACTAGAGACGAGCAACTAACTGCTGCAAGAGTGCATGCAATATACAAGGTCCAAGTATTGAGTTTTAAGAGTTCCCTTGAACTATTTTGCTTAAAAGCCTTTAACAAAAGCTATCCTGAAAATGGATACAAAGAGCTTTCAGAAATGACAGTTAATTACACAAAGGGCAATCCATTAGCATTAAAAGTATTGGGATCCTTTCTACACTCAAGGAGCATAAAAGAATGGGAAAGTGCATTGAGAAAACTCAAGGTTCATCCCAATGTGGACATCTACAATGTCTTAAAATTGAGTTATGATGGATTAGATGATTCAGATAAGAACATATTCCTTGATATTGCATTCTTTTTCAGAGGAGAATACAAGGATAATGCATAA 1374 0.3603 MAYSPFSSSSAFNVPLIKHDVFVSFRGIDIRTSFLSHLTKDLHRNQIDFFVDDKKLHPGDEISPTLLRAIEQSYISLVIFSKHYASSRWCMEELVKIIECMEQYKRIVIPVFYNVDPSHVRHQKGILAEAFDVHKERYEEEIMQSWKSVLKKTANLSGIHYPSKYRNESELIEDIVKNISEKLSHLLSNASESLIGIDEKLNSLERLMEMDPEEVRILGIWGMGGIGKTTIARAIFDRCASRYEGCCFLQNVREELQKSGEHSLYEKLISELLEGEHLLVKGSAHARSMYVKRRLSRKKVFIVLDDVDTLDILDYLIIKQICLAPGSRVIITTRDEQLTAARVHAIYKVQVLSFKSSLELFCLKAFNKSYPENGYKELSEMTVNYTKGNPLALKVLGSFLHSRSIKEWESALRKLKVHPNVDIYNVLKLSYDGLDDSDKNIFLDIAFFFRGEYKDNA* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2142 457 Gene3D - 351 435 IPR042197 -
Ahy2g2142 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 445 IPR027417 -
Ahy2g2142 457 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 455 - -
Ahy2g2142 457 Gene3D - 184 350 IPR027417 -
Ahy2g2142 457 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Ahy2g2142 457 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 455 IPR044974 GO:0006952
Ahy2g2142 457 Pfam TIR domain 18 191 IPR000157 GO:0007165
Ahy2g2142 457 PRINTS Disease resistance protein signature 294 308 - -
Ahy2g2142 457 PRINTS Disease resistance protein signature 217 232 - -
Ahy2g2142 457 PRINTS Disease resistance protein signature 386 400 - -
Ahy2g2142 457 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 158 IPR035897 -
Ahy2g2142 457 Pfam NB-ARC domain 204 421 IPR002182 GO:0043531
Ahy2g2142 457 SMART till_3 18 156 IPR000157 GO:0007165
Ahy2g2142 457 Gene3D - 15 183 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2142 Ahy-Chr2 96889356 96894143 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2142 3 456 WRKY Transcription Factor Family AT4G12020 29.348 2.47e-48 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2142 - - ahf:112754607 887.871