LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy2g2108	ATGCCCTCCCGTCCACCACCACTCTCCACGGCGGCGCCACCCCTCCAACACAACCACCACCACCACAACCAAAGAATCATTCTCATCGGATCCCTCTCCCTCACCATCCTCCTCCTCCTCTCTCTCCTCTTCACCCTCCTCACCTTCCTCTACCGGAAACTCTCCCTCCACCGCACCACCCCCTTCCCCCACCACCACCACCACCACAACAACCACCGCCGCTACTCCTACACGCTCCTCCGCCGCGCGACAAACTCCTTCTCCCCGTCCACCAAACTCGGCCACGGCGGTTTCGGCTCCGTCCACAGAGCCACCCTCCCTTCCGGCGAAACCGTGGCACTGAAGCTCATGGACTCGCCGGGCTCCCTCCAAGGCGAACGCGAGTTTCACAACGAACTCTCTCTCTGTTCGAATCTCAACTCACCTTTCATTCTCTCTCTCTTGGGTTTCTCTTCCGACAGAAGAAACCGCAAACTCATACTCGTCTATGAGCTAATGAAGAATCGAAGCCTCCAAGACGCGCTTTTGGATCGCAAGTGTCCCGAGCTTATGAACTGGAAAACGCGCTTCGATGTTGTAGTTTCGGTGGCCAAAGGGTTGGAGTACTTGCACCATTGTTGTGACCCTCCGGTGATTCATGGTGACATCAAACCGAGTAATATTTTGTTGGATTCTGAGTTTAGGGCTAAAATTGGGGATTTTGGGCTTGCCAGGGTGAAGGAGGAGGTTGGGGTTGTGGTGGTGGAGGAGGAAGTTCACGGTGGTGATTGTGGTGGCGGCGGCGGTGGTGATGAAGAGTGCGATCGTGGTTCGGTGGTGGAGAGTGTGGCGACTGGGACTACTGCTGGATTTGATTTGGAGAGGTCGCCAGAGAGTTTTGCGGCGGGGAGGGTTTTGGATTCAGATGCGTCTCCGGCGGCGGCGGGGACTTCGCCGGAGGTGGGGTTGGAGAAAGGTAGCGTCTTGTCGGATGGGTTGTTTGATGGGGTGAGTGTGGAGAGTGGGAATCAGAGGAGGAAGGGTGGCGTTAATGGCGGTGGTTCCGGCAGGGATTGGTGGTGGAAACAGGACAATGGTGGAGGGTCAGAATCAGGGAGGGTTAAGGATTATGTTATGGAATGGATTGGTAGTGAGATAAAGAAAGAAATGCCCAAGAATGAATGGGTTGCTTCTCCAAGTAGCATAAGTTGTGATGCAGAGAATAATGGTGGTGTTGAAGGATTGGATTCGGAAGCCAAAAACAAGAATAAGAACAAGAAGAAAAAGCAGAGAAAGAGGTTGGATTGGTGGGCTTCATTGGACGAGGAGAAGGTGAAGAATCAGCCGCAGCAGAAGAAGGAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGTGAGGAGCTGGCGAAGAAGAGCAAGAAGAAGAAGAGGAGCCTTGATAACAATGGTGGTGAAGCTTGGTGGCAGAACAAAGATGAGGACTTGGTGGTGGTTCAGGATCAGAAGAGAAAGAGGAAAAACAAGACCAGCAGAGGGAGCATTGATTGGTGGCTTGATGGTTTGAGTGGTGAACTAATCCGAAACAACAATGGCAGAAGGAATAGCCAAGATTGGGTGAGTGGTGACATACCAAAGAGTGGTGGAATCAGCAGCACTCCAAGCATGAGGGGGACTGTGTGTTATATTGCTCCTGAATATGGTGGTGGTGGCCAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCTGGGAGGAGACCCCTTCAAGTGACAGCGTCGCCGATCTCGGAATTCGAGAGGGCTAATTTGATTTCATGGGCTAGGCAACTTGCTCACAATGGCAGGCTCTTGGATCTTGTTGACACTAACATTCTTTCATTGGACAAGGAACAAGCTTTGCTCTGCATCACAATTGCCTTGTTGTGCCTCCAGAGATCGCCTGCGAAGAGGCCGTCCATGAAGGAGATTGTGGGGATGCTCTCCGGCGAGGCCGACACGCCTCACTTGCCATTCGAGTTCTCGCCGTCGCCGCCCTCGAATTTTCTCTTCAAGTCCAGGAAGAAGGCTCGGTGA	2082	0.5259	MPSRPPPLSTAAPPLQHNHHHHNQRIILIGSLSLTILLLLSLLFTLLTFLYRKLSLHRTTPFPHHHHHHNNHRRYSYTLLRRATNSFSPSTKLGHGGFGSVHRATLPSGETVALKLMDSPGSLQGEREFHNELSLCSNLNSPFILSLLGFSSDRRNRKLILVYELMKNRSLQDALLDRKCPELMNWKTRFDVVVSVAKGLEYLHHCCDPPVIHGDIKPSNILLDSEFRAKIGDFGLARVKEEVGVVVVEEEVHGGDCGGGGGGDEECDRGSVVESVATGTTAGFDLERSPESFAAGRVLDSDASPAAAGTSPEVGLEKGSVLSDGLFDGVSVESGNQRRKGGVNGGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKEMPKNEWVASPSSISCDAENNGGVEGLDSEAKNKNKNKKKKQRKRLDWWASLDEEKVKNQPQQKKEKNRKPREWWKEEFCEELAKKSKKKKRSLDNNGGEAWWQNKDEDLVVVQDQKRKRKNKTSRGSIDWWLDGLSGELIRNNNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTNILSLDKEQALLCITIALLCLQRSPAKRPSMKEIVGMLSGEADTPHLPFEFSPSPPSNFLFKSRKKAR*	694

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy2g2108	693	Pfam	Protein kinase domain	90	239	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy2g2108	693	Pfam	Protein kinase domain	548	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy2g2108	693	PANTHER	OS07G0586332 PROTEIN	1	693	IPR044576	-
	Ahy2g2108	693	MobiDBLite	consensus disorder prediction	332	365	-	-
	Ahy2g2108	693	SUPERFAMILY	Protein kinase-like (PK-like)	62	681	IPR011009	-
	Ahy2g2108	693	ProSiteProfiles	Protein kinase domain profile.	87	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy2g2108	693	SMART	serkin_6	87	663	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy2g2108	693	Gene3D	Transferase(Phosphotransferase) domain 1	525	671	-	-
	Ahy2g2108	693	Gene3D	Transferase(Phosphotransferase) domain 1	166	282	-	-
	Ahy2g2108	693	Gene3D	Phosphorylase Kinase; domain 1	60	165	-	-
	Ahy2g2108	693	ProSitePatterns	Protein kinases ATP-binding region signature.	93	115	IPR017441	GO:0005524
	Ahy2g2108	693	MobiDBLite	consensus disorder prediction	400	426	-	-
	Ahy2g2108	693	Coils	Coil	405	425	-	-
	Ahy2g2108	693	PANTHER	OS07G0586332 PROTEIN	1	693	-	-
	Ahy2g2108	693	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	211	223	IPR008271	GO:0004672\|GO:0006468
	Ahy2g2108	693	MobiDBLite	consensus disorder prediction	673	693	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy2g2108	Ahy-Chr2	96414547	96417714	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy2g2108	521	663	Receptor kinase-like Gene Family	AT3G58690	34.228	1.28e-13	71.6

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XI	Ahy2g2108		Pkinase	2.10E-27	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy2g2108	-		-	aip:107626015	1224.15