LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy2g2083	ATGACTTCTTCTTCTTCTTCTTCATCCACTGCTCCTCAATTCAAATATGACGTCTTCATAAGTTTTAGAGGTTCAGACACTCGCCGTGGCTTTTTCAGCCATTTGCTTACAGCATTACGTCAGAAAAAGATTCATGTATATGTAGATTATAACCTTAAAGAAGGAAATGAAATATTACCAGCACTTTTCGCAGCAATTGAACAATCACAAATTGCATTAGTTATTTTCTCGAAAGACTATGCCTCTTCGAAATGGTGCTTAGAAGAGCTTGTCAAAATAACTGAATGCCAAAAAGAGAAGGGTCAAATCATCATACCTATTTTCTACAATGTAGAGCCTTCAGAAGTGCGACATCAGAAGAGGTCCTATGCAGAAGCATTTGTTAAACATGAAAATGATTTCAAGGACAAAGTCAATAAATGGAGAGCTGCACTGAAGGGAGTCTCAGATTTATCAGGATTCCATTCCAAAAATTTTAGAAGTGAGGCTGGGCTCATTGAAGAAGTTGTCAAACACATTTTGAAAACTTTAGATGATATGCACCCAGCTTATGACTTTCAAGGCCTTGTTGGAATTAATAAACCAGTCGACGAACTTGAGTCAATAGTTTTTGCCAATGGCTCAAAAGATATTCGTGTTATAGGAATTTGGGGCATGGGTGGCATTGGTAAGACTACTATTGCCACTGTATTATTTAACAAATTGTATTCTCAATATGAAAGCCGTCATTTTCTAGCAAATGTGAGAAAGGAGTCACAGAAGTGGGGAATAATTCAGTTAAGAGACAAAATTCTTTCTGTATTCACAGATGACAAGGATTTAAACATTGGTGTTCCCAACGGAATACTGAAACATGTTTTGAGAAAACTTCGTTGCAGAAAGATTCTTGTTGTTCTTGACGATGTTAGTACTTCTGATCAAATCATAAACTTAGTTGGAGGACATACTTGGTTGGGTCCTGGTAGCAGAATCATTGTTACAACTAGAGATAAGCATGCAATTTGTAAAGAAGCAGATGACATATACAAAGTAAAGGCATTGGAATCTAGTGATGCCCGACAGCTTCTAAATTTGCATGCCTTTGATGGAACTGATGGACATTGCCTTGAATTGCGCTGGCATAATCTTGTGTCGAAAATGGTTGAATATGCTAAAGGCATCCCGTTAGGATTGAAAGTTTTGGGTTCTTTTCTTTATGGAAAATGTTTTGAAGATTGGGGATGTCAATTAAAGAAGCTTCAGGAAATGCCCTTTCCAGAGATTCATAATGTGTTGAGATTAAGTTATGAAGGATTGGATCACCAAGAGAAGAGCATATTTTTATATGTTGCTTGTTTCTTCAAAGACGATGAAGGAAAGGATACTGTAGAGAATTTATTAGATGCTTGTGGTTACTCAACATCTATTGCATTAAAAACTCTCCAAGATAGAGCTCTTATAAGCATTGAGCATTGTGTATCCATGCATGACTTGATTCGAGAAATGGGCCGATGGATTGTGCGTCAACAAAGCATCAATAAGCCTGGAGAACAACGTCATTTATGGGATCCTCATGACATTCATCGTGTATTGAAACATAGAGAGGGCACAGACCATATTGAAAGCTTAACCTGGAACATGTCAAGTGTTAGTGCTGACATAAGCCTAAGTCCTCATTTGTTTGCTAGAATGGAAAATCTAAAACTTCTGAGGTTTTATTACAATAATAATAATAATAATAGCAGTGATTATTACTATTATTATTATTGTTCAGATAATAACACGTGCCAAGTGCATCTTCCAGAAGGTCTTGAAATACTGCCACAGAAACTACGACTCTTTCATTGGGACAATTACCTTGCGAAATCCTTTCCAACAACATTCAATGCAGAGTGTCTTGTTGAACTTCGTATGAAAGAAAGTCGCGTTGAAAAGCTCTGGGATGGTGTACAGGATATACCAAATATGAAAAGGATTGTTCTTAATGGATCCAAACAATTGATCGAGATTCCAGATTTATCTAAAGCCTTGAGTCTTCAAGAATTAGAACTCATGGGATGCATAAATTTGCTTTCGGTTCACCCATCAATTTTTTCTCTCCCAAAACTTGTTACGGTGACCCTATGGAATTGCCGAAGGCTTGAGAAACTTCCAGGGTGGTGTGAAGTGAAAAAGGAAGTATTGAGTGAAGCATCAGCGTCATCAACATCATCGTGCTCAGGATCATCACATAATTCCGCTCCAAGCTTCAGTACTTAA	2238	0.3735	MTSSSSSSSTAPQFKYDVFISFRGSDTRRGFFSHLLTALRQKKIHVYVDYNLKEGNEILPALFAAIEQSQIALVIFSKDYASSKWCLEELVKITECQKEKGQIIIPIFYNVEPSEVRHQKRSYAEAFVKHENDFKDKVNKWRAALKGVSDLSGFHSKNFRSEAGLIEEVVKHILKTLDDMHPAYDFQGLVGINKPVDELESIVFANGSKDIRVIGIWGMGGIGKTTIATVLFNKLYSQYESRHFLANVRKESQKWGIIQLRDKILSVFTDDKDLNIGVPNGILKHVLRKLRCRKILVVLDDVSTSDQIINLVGGHTWLGPGSRIIVTTRDKHAICKEADDIYKVKALESSDARQLLNLHAFDGTDGHCLELRWHNLVSKMVEYAKGIPLGLKVLGSFLYGKCFEDWGCQLKKLQEMPFPEIHNVLRLSYEGLDHQEKSIFLYVACFFKDDEGKDTVENLLDACGYSTSIALKTLQDRALISIEHCVSMHDLIREMGRWIVRQQSINKPGEQRHLWDPHDIHRVLKHREGTDHIESLTWNMSSVSADISLSPHLFARMENLKLLRFYYNNNNNNSSDYYYYYYCSDNNTCQVHLPEGLEILPQKLRLFHWDNYLAKSFPTTFNAECLVELRMKESRVEKLWDGVQDIPNMKRIVLNGSKQLIEIPDLSKALSLQELELMGCINLLSVHPSIFSLPKLVTVTLWNCRRLEKLPGWCEVKKEVLSEASASSTSSCSGSSHNSAPSFST*	746

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy2g2083	745	Gene3D	-	346	433	IPR042197	-
	Ahy2g2083	745	Gene3D	-	176	343	IPR027417	-
	Ahy2g2083	745	SUPERFAMILY	L domain-like	488	713	-	-
	Ahy2g2083	745	Pfam	TIR domain	15	192	IPR000157	GO:0007165
	Ahy2g2083	745	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	10	733	-	-
	Ahy2g2083	745	Gene3D	Ribonuclease Inhibitor	532	731	IPR032675	-
	Ahy2g2083	745	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	173	442	IPR027417	-
	Ahy2g2083	745	MobiDBLite	consensus disorder prediction	726	745	-	-
	Ahy2g2083	745	Pfam	NB-ARC domain	194	421	IPR002182	GO:0043531
	Ahy2g2083	745	ProSiteProfiles	TIR domain profile.	14	177	IPR000157	GO:0007165
	Ahy2g2083	745	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	10	733	IPR044974	GO:0006952
	Ahy2g2083	745	Pfam	Leucine Rich Repeat	625	644	IPR011713	-
	Ahy2g2083	745	Gene3D	-	13	175	IPR035897	-
	Ahy2g2083	745	PRINTS	Disease resistance protein signature	384	398	-	-
	Ahy2g2083	745	PRINTS	Disease resistance protein signature	289	303	-	-
	Ahy2g2083	745	PRINTS	Disease resistance protein signature	213	228	-	-
	Ahy2g2083	745	PRINTS	Disease resistance protein signature	691	707	-	-
	Ahy2g2083	745	SMART	till_3	15	151	IPR000157	GO:0007165
	Ahy2g2083	745	SUPERFAMILY	Toll/Interleukin receptor TIR domain	5	154	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy2g2083	Ahy-Chr2	96133526	96149306	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy2g2083	12	727	WRKY Transcription Factor Family	AT4G12020	31.837	7.95e-92	313

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy2g2083	-		-	ahf:112753923	1460.66