Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2028 ATGAGGCATATCTTTGTTGCCACTTTGTTTCTATTAGTCCTCCTAACTGTTATGAGTGCCAACACCATGGTGGCAGCATGGAATTCCTCGTCCTTGAACGAGGAACAAAAGGCCTTGCTCCATATCGGGTGGACGGAAGGTCGCAACATCTCAAAACATTGTAACTGGACTGGTATTGTGTGCAATGAAGCTGCAAGTGTCATAGAGATTTCAACAAGGCGTTATTTTGTTATCCCTCCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTGATCCGTCTAGAACTGAGTGGCATGAGACTCAAGGGAATTATTCCTACTGAAATAAGCACTCTTACAAAGCTTATGTACCTTGATCTTTCCTATAACTATCTTGAAAGTGGGTTACCTACCTCAATCTCAAATCTCACTCAACTTATAACACTTAATGTTTCTAACAACTTTCTCAGTGGTGTTATTCCATCTACTTTTGGGCACCTCAAGTATTTGGTTGAACTCTCCCTAGACTCGAACCAACTTCAACATCCCATTCCTAAAGACTTAGGGAACTTGAAGCATTTGTCTCTTTCAAATAACTCATTCAATTGTTCAATCCCTCCCTCTATGGGGCAATTGGATAAATTGAAATTTCTCTCCCTTGGTTCGAACCATATCGAAGGTCCCATCCCCATAGAACTAGAGCACTTGGTCAATCTGGAAGTTTTAGACCTTTCTCACAACAAGATTTCTGGTGTTATACCATCTTGGATTGGACAACTCTCTAGACTTTCAATACTAGATGTTTCCAACAATAGACTTGAGGGACCAATTCCATTTGGTATTCTAAATCATTGCAATTATGTGCAACTAAGTAATAATTCTATAAGTGGATCCCTTCCTTCTCAAATTGGCAATCTTTCTTATCTTGACCTTAGTTACAATAACCTCTCTGGAAACATACCTGTGGGAATCTATTCTGTATCCTACCTCAACATCTCTTACAATTCCTTTGATTCGGATCACCAACTTTGTGATTTTCTGAAAGACTCATTGATTGGTAATAATCCCCCTTGCTATTCTGCAACCCATGATCACTCAAGTCCTATTCTTGCAGTAATCATAGTGTCCATCTTATATGGCATATGCATTTCAAAAGTATTTGTATGCCTAGATTTCTGGTGTCCATTCCAAAATGAGTCCAAAGATGATAATCAAAGGAACAATGGAGATTTCGTTTCAATTTGGAACTATGATGGTAAAATTGCATTTAAAGACATAATTAAAGCCACAGAAGACTTTGATATAAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCACAGCTTCCTAGTGGCAGAAATGTTGCACTAAAGAAGCTTCACAATACAGAGTCTGAAAATCCATCATTTTACAAGAGTTTTAGCAATGAGGTCAAGGTCTTGACAGAAATCCGCCACCGCAACATCATTAGGCTTTATGGTTTCTGTTTGCACAACGGCTGTATATTTTTGGTGTATGAGTATATGGAAAAGGGAAGTTTGTTCTATAACCTAGCCATTAATGAAGAAGCTCAAGTGCTGAACTGGAGTAAGAGAGTAAACATTATCAAAGGGACTGCATTTGCTCTCACTCATATGCACCATCATTGCACTTCACCCATTGTCCATCGAGATGTAACTAGTACCAATGTTTTGTTGACTTTAAATTTAGAGGCTTGTCTATCAGATTTTGGTACAGCTAAACTACTTTCTTCTGATTCATCTAATCAAACTCTATTAGCTGGCACTCCTGGATACATTGCTCCAGAGATGGCTTATAACATCAACGTGACAACAAAATGTGATGTTTATGATTTTGGTGTGGTGACTTTGGAAACAATAATGGGCGAACACCCTAAGGAACTAATTTCCAATGTGTCAAAACCATCTGCTCCAAAGATCATGCTCAAAGATATACTGGATTCACGTATTCGATTGCCTTTTCTTCGAAAAGAAATGCAGGATATTGTACTTGTTGTAACATTAGCACTAGCATGCTTGCATCCCAACCCAACATCAAGACCTTCAATGCAGGACATAGCTAATAAGCTTTTGTTTTCAAACTCAGCCATTGCTTTGGCATTTTGA 2124 0.3851 MRHIFVATLFLLVLLTVMSANTMVAAWNSSSLNEEQKALLHIGWTEGRNISKHCNWTGIVCNEAASVIEISTRRYFVIPPSELRNFNFTAFPNLIRLELSGMRLKGIIPTEISTLTKLMYLDLSYNYLESGLPTSISNLTQLITLNVSNNFLSGVIPSTFGHLKYLVELSLDSNQLQHPIPKDLGNLKHLSLSNNSFNCSIPPSMGQLDKLKFLSLGSNHIEGPIPIELEHLVNLEVLDLSHNKISGVIPSWIGQLSRLSILDVSNNRLEGPIPFGILNHCNYVQLSNNSISGSLPSQIGNLSYLDLSYNNLSGNIPVGIYSVSYLNISYNSFDSDHQLCDFLKDSLIGNNPPCYSATHDHSSPILAVIIVSILYGICISKVFVCLDFWCPFQNESKDDNQRNNGDFVSIWNYDGKIAFKDIIKATEDFDIRYCIGTGAYGSVYKAQLPSGRNVALKKLHNTESENPSFYKSFSNEVKVLTEIRHRNIIRLYGFCLHNGCIFLVYEYMEKGSLFYNLAINEEAQVLNWSKRVNIIKGTAFALTHMHHHCTSPIVHRDVTSTNVLLTLNLEACLSDFGTAKLLSSDSSNQTLLAGTPGYIAPEMAYNINVTTKCDVYDFGVVTLETIMGEHPKELISNVSKPSAPKIMLKDILDSRIRLPFLRKEMQDIVLVVTLALACLHPNPTSRPSMQDIANKLLFSNSAIALAF* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2028 707 Pfam Leucine rich repeat 230 269 IPR001611 GO:0005515
Ahy2g2028 707 Gene3D Transferase(Phosphotransferase) domain 1 508 703 - -
Ahy2g2028 707 Gene3D Phosphorylase Kinase; domain 1 393 507 - -
Ahy2g2028 707 PRINTS Leucine-rich repeat signature 235 248 - -
Ahy2g2028 707 PRINTS Leucine-rich repeat signature 256 269 - -
Ahy2g2028 707 SMART LRR_sd22_2 115 141 - -
Ahy2g2028 707 SMART LRR_sd22_2 163 189 - -
Ahy2g2028 707 SMART LRR_sd22_2 256 271 - -
Ahy2g2028 707 SMART LRR_sd22_2 208 231 - -
Ahy2g2028 707 SMART LRR_sd22_2 232 250 - -
Ahy2g2028 707 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 17 275 - -
Ahy2g2028 707 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 88 699 - -
Ahy2g2028 707 ProSiteProfiles Leucine-rich repeat profile. 234 256 IPR001611 GO:0005515
Ahy2g2028 707 SMART LRR_typ_2 184 208 IPR003591 -
Ahy2g2028 707 SMART LRR_typ_2 232 255 IPR003591 -
Ahy2g2028 707 SMART LRR_typ_2 299 323 IPR003591 -
Ahy2g2028 707 SMART LRR_typ_2 115 138 IPR003591 -
Ahy2g2028 707 SMART LRR_typ_2 256 280 IPR003591 -
Ahy2g2028 707 SMART LRR_typ_2 139 162 IPR003591 -
Ahy2g2028 707 Gene3D Ribonuclease Inhibitor 184 275 IPR032675 -
Ahy2g2028 707 ProSiteProfiles Protein kinase domain profile. 429 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2028 707 Gene3D Ribonuclease Inhibitor 276 362 IPR032675 -
Ahy2g2028 707 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 275 - -
Ahy2g2028 707 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 88 699 - -
Ahy2g2028 707 ProSitePatterns Tyrosine protein kinases specific active-site signature. 553 565 IPR008266 GO:0004672|GO:0006468
Ahy2g2028 707 Pfam Protein kinase domain 434 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2028 707 ProSitePatterns Protein kinases ATP-binding region signature. 435 457 IPR017441 GO:0005524
Ahy2g2028 707 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515
Ahy2g2028 707 Pfam Leucine Rich Repeat 186 204 IPR001611 GO:0005515
Ahy2g2028 707 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515
Ahy2g2028 707 Gene3D Ribonuclease Inhibitor 23 183 IPR032675 -
Ahy2g2028 707 SUPERFAMILY L domain-like 50 342 - -
Ahy2g2028 707 SUPERFAMILY Protein kinase-like (PK-like) 409 699 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2028 Ahy-Chr2 95115165 95117365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2028 88 606 Receptor kinase-like Gene Family AT4G08850 37.828 2.77e-102 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy2g2028 Pkinase 2.40E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2028 - - ahf:112730550 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2349 12 111173855 111177236 Ahy2g2028 2 95115165 95117365 hybridization