Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2022 ATGACAAATTCAGGTTGCAATTTACTTGCATTAATGAAGCTTATCTTTGTTGACACTTTGTTTGCCTTAGTCCTCCTAACCGTTATGAGTGCCAACACCATGATGGTAGCATCAAATTCCTCGTCCTTGAACGAGGAACAAAAGGCCTTGCTCCATAGCGGGTGGACGGAAGGTCGCGACATCTCAAAACATTGTAACTGGACTGGTATTGTGTGCAATGACGCTGGAAGTGTCATAGAGATTTCAACAAGGCGTTATTTTTTTATCCCTCCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTGATCCGTCTAGAACTTACTGGTTTGGAACTCAAGGGAACCATTCCCAGTGAAATAAGCACTCTTACAAAGCTTATGTATCTTGATCTCTCTTCTAATTATCTTGAAGGTGAGTTGCCTACTTCAATTTCAAATCTCACTCAACTTAAGTTAGTTAATGTTGCTAGCAATTTTCTTAGAGGTGTTATTCCTTCCACTTTTGGCCAGTTGAAGTGTTTGGCTCAACTTTCTCTTCACTCAAACAATCTTGAAGGCCCCATTCCCGAAAGGCTAGGGTACTTAAAGCATTTAGAGCAGTTAACTCTGTCAAATAACTCACTGAATGGTTCAATCCCTTCTACCTTTGGACAACTAGAGGATTTGGAATCTTTGTCCCTTGATTCAAACCATATTGAAGGTTCCATCCCTGTAGAATTTGAGAACCTGTTCCATTTGAAAGCTTTAGACCTTTCCCATAACAATATTTCTGGTGTTATACCATCTGGGATTGGACAACTCTCTAGGCTTTCAACTTTAGATATTTCCAACAATAGCCTTAAGGGACCAATTCCATTTGGTATTCTATATCATTGCAGTTATGTGCAGCTAAGTAACAACTTTTTAAGTGGACATATTCCTTCTCAAATTGGCAATCTTTCTTACCTGGACCTCAGTAATAATAGCCTCTCAGGAAGCATACCAGAGGGACTCCATTCCGTTCCATATCTCAATATATCTTACAATTCCTTTGTTCCAGATACACACTTCTGTGGTTTTCCAAGTGAAGCACTGATTGGTAATAAGCAGTCACCCTCTTGCTCTTCTCCATATAGTACCATAGCACTAGTTTCCCTTGCTGCCTTGAATTGCTTCTTCATTACAACAGTGTTCATATGGCTTGGAATCGGTGTCTTCTGTCCCCTCCAAAGAGAGTACGGATTTGAGGAAAGAAGCAAGAATGGGGATATCTTCTCAATTTGGAACTATGATGGTAAAATTGCATTTAAAGACATAATCAAAGCCACAGAAGACTTTGATATAAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCACAGGTTCCTAGTGGCAGAAATGTTGCACTAAAGAAACTTCACAATGCAGAGTCTGAAAATCCATCATTTTACAAGAGTTTTAGCAATGAGGTCAAGGTCTTGACAGAAATTCGTCACCGTAACATCATTAGGCTTCATGGTTTTTGTTTGCACAACAGCTGTATGTTTTTGGTGTATGAGTATATGGAAAAGGGAAGCTTGTTCTATAACCTAGCCATTGATGAAGAAGCTCAAGAGTTGAATTGGAGTAAGAGAGTAAACATTATCAAAGGACTGCATTTGCTCTCACTCATATGCACCATCATTGCACTCCACCCATTGTCCATCGAGATGTAA 1713 0.3952 MTNSGCNLLALMKLIFVDTLFALVLLTVMSANTMMVASNSSSLNEEQKALLHSGWTEGRDISKHCNWTGIVCNDAGSVIEISTRRYFFIPPSELRNFNFTAFPNLIRLELTGLELKGTIPSEISTLTKLMYLDLSSNYLEGELPTSISNLTQLKLVNVASNFLRGVIPSTFGQLKCLAQLSLHSNNLEGPIPERLGYLKHLEQLTLSNNSLNGSIPSTFGQLEDLESLSLDSNHIEGSIPVEFENLFHLKALDLSHNNISGVIPSGIGQLSRLSTLDISNNSLKGPIPFGILYHCSYVQLSNNFLSGHIPSQIGNLSYLDLSNNSLSGSIPEGLHSVPYLNISYNSFVPDTHFCGFPSEALIGNKQSPSCSSPYSTIALVSLAALNCFFITTVFIWLGIGVFCPLQREYGFEERSKNGDIFSIWNYDGKIAFKDIIKATEDFDIRYCIGTGAYGSVYKAQVPSGRNVALKKLHNAESENPSFYKSFSNEVKVLTEIRHRNIIRLHGFCLHNSCMFLVYEYMEKGSLFYNLAIDEEAQELNWSKRVNIIKGLHLLSLICTIIALHPLSIEM* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2022 570 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 44 347 - -
Ahy2g2022 570 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 104 551 - -
Ahy2g2022 570 ProSitePatterns Protein kinases ATP-binding region signature. 448 470 IPR017441 GO:0005524
Ahy2g2022 570 SMART LRR_typ_2 313 336 IPR003591 -
Ahy2g2022 570 SMART LRR_typ_2 222 245 IPR003591 -
Ahy2g2022 570 SMART LRR_typ_2 126 149 IPR003591 -
Ahy2g2022 570 SMART LRR_typ_2 150 173 IPR003591 -
Ahy2g2022 570 SMART LRR_typ_2 246 270 IPR003591 -
Ahy2g2022 570 SMART LRR_typ_2 198 221 IPR003591 -
Ahy2g2022 570 Pfam Protein kinase domain 447 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2022 570 Pfam Leucine Rich Repeat 315 336 IPR001611 GO:0005515
Ahy2g2022 570 SUPERFAMILY L domain-like 64 347 - -
Ahy2g2022 570 SMART serkin_6 442 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2022 570 Gene3D Ribonuclease Inhibitor 293 375 IPR032675 -
Ahy2g2022 570 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Ahy2g2022 570 Gene3D Ribonuclease Inhibitor 194 292 IPR032675 -
Ahy2g2022 570 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 44 347 - -
Ahy2g2022 570 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 104 551 - -
Ahy2g2022 570 PRINTS Leucine-rich repeat signature 249 262 - -
Ahy2g2022 570 PRINTS Leucine-rich repeat signature 270 283 - -
Ahy2g2022 570 SUPERFAMILY Protein kinase-like (PK-like) 423 551 IPR011009 -
Ahy2g2022 570 ProSiteProfiles Leucine-rich repeat profile. 315 337 IPR001611 GO:0005515
Ahy2g2022 570 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Ahy2g2022 570 Pfam Leucine rich repeat 225 283 IPR001611 GO:0005515
Ahy2g2022 570 Gene3D Phosphorylase Kinase; domain 1 410 520 - -
Ahy2g2022 570 ProSiteProfiles Protein kinase domain profile. 442 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2022 Ahy-Chr2 95027198 95030087 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2022 105 555 Receptor kinase-like Gene Family AT4G08850 36.461 1.66e-78 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy2g2022 Pkinase 5.90E-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2022 - - ahf:112752825 1125.54