Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2018 ATGTCTTCTTTGGACCTCTCATCAAATAAATTAGGTGGCTCACTACCATCAAGTATTGCCAAAGCCATAAGCCTCTCATACATAGACCTCTCTCACAACCACTTGAAAGGTCCTATACCAACTCTTTTTCCTTATTGTGCTCTTAATGCAACAATAGATTTATGCCACAACATGTTACATGGAAGCATTACTTTCAAAATCGGTTGTGCTACCAATGTTGACCTTAGCCATAATTTTTTCAGTGGTGAGCTTCCATCTGTTCATGGATTAGCTTCACAGCTAGAGAGTTTGGATCTTAGTTACAATAATTTTACAGACAAGCTCCTAGATTATTGTTCTTTCCAAAAAGACTCATTCATTGGATGTGGCTCGCTAAATTTTTCATCATGCCACTCTGTCCAACAAAGAAAGTCACCATCATCAAATAAAGCAAAGCACACAATTGTAATTGCTCTTTCCATCATTGGATTCATTCTCTTACTATTTCTTGCCACCTTGTGTTTTACCAAACATGTGGCTAAGACGAAAGTTGAAAGAGTTTCTACAAAGAATGGAGACTTGTTCTCTATATGGAACTATGATGGAAAAATTGCATTTGAGGACATAATTGATGCAACACAAGACTTTGATATTAGATACTGCATTGGAACTGGTGCATATGGTAGTGTTTACCAAGCAAATTTGCCAAGTGGTAGAACTGTTGCATTGAAGAAACTTCGACAAAAGGAATCTCAGAACCCTTCATTTGACAAGAGTTTCCGCAATGAGTTTATGATGTTATCGCGAATCCGGCATAGAAACATTGTCAAGCTTTATGGCTATTGTCTTCAGAACAGAGATGTAACATGTAACAATGTTTTGTTGGACTCAAATTTGGAGGCTTTTGTTTCGGATTTTGGCACTGCTAGACTTCTTGATCCTGATTCTTCAAATCAAACATTGCTAGTTGGTACACGCGGCTATATTGCCCCAGTTTTTGGAGTGGTGGCGTTGGAGACATTGATGGGAAGGCACCCAGAAGCGATACTATCACCATCTTTATCAAGCTCTTATATTCAAAACATGTTGAAGGATCTCTTGGACTCTCGCCTTCGTCTTCCTATGCTTCAAAGAGATGCAAAAGAGATAGTTTTAGTGGCAACAATAGCATTGGCATGCTTGAATTCCAATCCAAAGTTGAGACCATCAATGCAAGAAGTGGTTCAAGAGCTCTCTGATTCCAAACTACCATTGTCTTTGTCTTTCTTTGAAATTTCAATTCACCAATTGATGAATCACAACAAGAGCTGCATCTTCTCTCATCTTGAAAAGACCCTTAAAAAATTGGCGTATGCCACTCTATGCAATGTGCACACGGTATTCTTTAGTAAAAGGCGAAAGAATAGTTCGCTCTGTGCACAGTGCGTGGCTGCGTGCTCTAAGAATGATGTATTTAGTGGATTTTATACTGGCTGTCATGTCCAAGACATTGGTGATGTCTCCGATGTAGGACTCCAAATGACAAAGATATTCACTTGTTCATGGTTGTACATGTTATCTTGA 1542 0.3878 MSSLDLSSNKLGGSLPSSIAKAISLSYIDLSHNHLKGPIPTLFPYCALNATIDLCHNMLHGSITFKIGCATNVDLSHNFFSGELPSVHGLASQLESLDLSYNNFTDKLLDYCSFQKDSFIGCGSLNFSSCHSVQQRKSPSSNKAKHTIVIALSIIGFILLLFLATLCFTKHVAKTKVERVSTKNGDLFSIWNYDGKIAFEDIIDATQDFDIRYCIGTGAYGSVYQANLPSGRTVALKKLRQKESQNPSFDKSFRNEFMMLSRIRHRNIVKLYGYCLQNRDVTCNNVLLDSNLEAFVSDFGTARLLDPDSSNQTLLVGTRGYIAPVFGVVALETLMGRHPEAILSPSLSSSYIQNMLKDLLDSRLRLPMLQRDAKEIVLVATIALACLNSNPKLRPSMQEVVQELSDSKLPLSLSFFEISIHQLMNHNKSCIFSHLEKTLKKLAYATLCNVHTVFFSKRRKNSSLCAQCVAACSKNDVFSGFYTGCHVQDIGDVSDVGLQMTKIFTCSWLYMLS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2018 513 Gene3D Transferase(Phosphotransferase) domain 1 280 437 - -
Ahy2g2018 513 ProSiteProfiles Protein kinase domain profile. 209 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2018 513 Gene3D Ribonuclease Inhibitor 1 148 IPR032675 -
Ahy2g2018 513 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 278 428 - -
Ahy2g2018 513 Pfam Leucine Rich Repeat 93 112 IPR001611 GO:0005515
Ahy2g2018 513 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 279 - -
Ahy2g2018 513 SUPERFAMILY L domain-like 3 109 - -
Ahy2g2018 513 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 278 428 - -
Ahy2g2018 513 Pfam Protein kinase domain 214 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g2018 513 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Ahy2g2018 513 Gene3D Phosphorylase Kinase; domain 1 169 279 - -
Ahy2g2018 513 SUPERFAMILY Protein kinase-like (PK-like) 199 427 IPR011009 -
Ahy2g2018 513 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2018 Ahy-Chr2 94988219 94990207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2018 4 324 Receptor kinase-like Gene Family AT4G08850 32.581 8.24e-50 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy2g2018 Pkinase 2.00E-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2018 - - ahf:112728702 1008.44