Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1992 ATGGAAGGAACCCTACAGAAAAGAAACTCGATCGCAGACTCAGGAATTCGCAGAGAATTTAAAGTGACTGTGGCCTTCGACTTGTGGATCCGTGATAACGGCGGAGGTTGGAATCTAAGTAAATGGTCATCGCAGCGGAGGCCTTGTTTATCTCACCCGCCCGATCGCACGAGTTCGCACCATAGATCGCAGATCGTGTTAATTAAAGGCGGTGGACATCGCGCAATTTTGTTCGTCGACGCGTGGGTCCGATCGCCCTGTGCAAGTGGAGGCTGTGAGGATGTTGGAAGCATGTTGGATAGTAGATGTGGTGGTAAAGTAAGGGTTTTTGATGTTGACATGTTTGGCTTTCAGGTAATAATGGCATCAAGTAGCAACTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGTGGACAACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGGACACAATGTATGATACCAGAGTGGAGGAAGATGCTGAGTCATCCGATTGGGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCTAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGCTGTAACCCGATGTGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGAGAGATTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTGTTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGGTACAAGTTGGGATCAGGGCAACACCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAGCATTCGACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTGTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGAATGGCGACCCGGCCATGCGTATAGCAATCCGCACCGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCTAACATAAGTGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTCAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTGGAGTACAGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTTTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTGATGACAATGACAACCCTCATGCATATACTCTTCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTACTTGCAGCTGCATGCGTATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAGGGCAGCCAAATTGGAGATACATAACCAATGTGGTGAGCAACACACTGCTGAACCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGTAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGCTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGCTTAAGACCATTAACGGATAATATGACAACAGGAAATGATTGCGGGCTGAAGGACCCCATTCGTGTCAGGACAAAAGGCACGGCTCGGATGAGTCAAGCAGGCGGTTCTGCGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCAACGGAGCCGCGCAACCTTCAACGAGGAACAAAGAATCACTTGCTGGGAGAAATAAACGCAAGCGAACGAAGGTTACCACCTAA 2628 0.4802 MEGTLQKRNSIADSGIRREFKVTVAFDLWIRDNGGGWNLSKWSSQRRPCLSHPPDRTSSHHRSQIVLIKGGGHRAILFVDAWVRSPCASGGCEDVGSMLDSRCGGKVRVFDVDMFGFQVIMASSSNFCKDACMWNEPLVDNWMEGNAGVSNPQDTMYDTRVEEDAESSDWEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKAVTRCGCMAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAVRYLEGLARMDGKMFWRYKLGSGQHLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITNGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRHCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYIRGRFFAGVQTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKFGWTMFTREMFLRYRDSLKRCVRVRICEFDDNDNPHAYTLQKYRRPEMNWKVYRDHISNRFTCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSRAAKLEIHNQCGEQHTAEPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKLYSNKLMSDALFLEIKYGLRPLTDNMTTGNDCGLKDPIRVRTKGTARMSQAGGSAPKTKRKCSTCGKLGHRRTRCPNGAAQPSTRNKESLAGRNKRKRTKVTT* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1992 875 ProSiteProfiles Zinc finger SWIM-type profile. 676 709 IPR007527 GO:0008270
Ahy2g1992 875 PANTHER OS02G0262500 PROTEIN 165 746 - -
Ahy2g1992 875 SUPERFAMILY Retrovirus zinc finger-like domains 814 851 IPR036875 GO:0003676|GO:0008270
Ahy2g1992 875 MobiDBLite consensus disorder prediction 816 875 - -
Ahy2g1992 875 ProSiteProfiles Zinc finger CCHC-type profile. 832 849 IPR001878 GO:0003676|GO:0008270
Ahy2g1992 875 Pfam FAR1 DNA-binding domain 187 276 IPR004330 -
Ahy2g1992 875 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 165 746 IPR031052 GO:0006355
Ahy2g1992 875 SMART 26again6 684 711 IPR006564 GO:0008270
Ahy2g1992 875 Pfam MULE transposase domain 396 490 IPR018289 -
Ahy2g1992 875 Pfam SWIM zinc finger 685 706 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1992 Ahy-Chr2 94672264 94676923 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy2g1992 MULE 1.50E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1992 - - aip:107611673 1550.8