Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1988 ATGGCAGAAATGGGTTTATTATTCTCCAATTTTCTCATTGTTCTCTTCTTTCTATCAACGTTTGCTTATGGTTATTCTTCAAATGATGTTAAACATTGGTGTAGCCAAACCCCAAACCCTCAACCATGTGAGTATTTCTTGAGCAATAACCCTAATCACTTTCACAAACCCATTAAGCACAAAGGAGATTTTCTCAAGCTTTTATTGCAACTTGCTCAAGAGAGAGCACTCATAGGCCATGCAAACACTCTTTCACTTCACTCAAAGTGCCACAACCAACTTGAAAGAGTTGCATGGAATGATTGTGTTAAGCTCTATCAACTAACCATTCATAAGCTCAACAAAATCCTAGATCCTAACACCAAGTGCTCCAAAGTTGATGCTCAAACATGGCTTAGCACTGCTCTCACAAATCTTGAGACATGCAAAGCTGGCTTCTATGAACTTGGTGTTCAAGACTCTCTTCTTCCTCTAATGTCCCACAATAATCTTACTAAGTTGCTAAGCAACCTTTTGGCTCTTAATAACAAGGGTGAATCCCATCAAGAGCCAAGTTACAAAGATGGATTCCCAACATGGGTCAAGCAAGGTGACAAAAAATTGCTACAAGCATCTTCTCCAGCATCTCAAGCCAATGTGGTGGTGGCCAAAGACGGATCTGGAAAATACACAACAGTTATGGCAGCCATAAACGCAGCACCAAATTATAACAGTGGAAGGTATGTGATATATGTGAAGGCCGGGATTTACAACGAGCAAGTTGAAATAGAGGCAAATAATATAATGTTGATCGGAGATGGTATCGGAAAAACCATAATCACCGGCAGCCAAAGTGTTGGGGGAGGCAGCACAACCTTTAATTCATCCACTGTTGGTATTATGGGAGAAGGATGTATTGCTCAAGGAATCACATTTAGAAACACTGCAGGTGCAGCAAATCAACAAGCTGTTGCATTGCGTTCTGGATCTGACTTATCAGTTTTTTATCGATGCAGTTTTGAAGGTTATCAAGATACTTTATTAACTTTATCTGACAGACAATTCTATAGAGAATGTGACATTTATGGCACTGTTGACTTTATCTTTGGTAATGCTATTGTGGTGTTTCAAAATTGCAACATATTTGTAAGAAAGTATCCAGAAACAACGAACACAATCACTGCACAAGGAAGAATTGATGCAAAACAAAACACTGGATTTTCCTTTGTCAATTGTGTGGTTACAGTTGCACCAGATTTGAAAGCAGTTCAAAGCTCTATGAAGGCATATCTTGGAAGGCCATGGCAAAAATATTCAAGAACAGTTTTCATGAAGAGTTATTTTGATAGCTTGATTGTTCCAGCAGGTTGGTTGGAATGGAATGGTGACTTTGCATTAAGTACTTTGTATTATGGAGAATACATGAACACAGGTCCTGGATCTTCAACCACAAACAGAGTTAAATGGGGTGGTTATCATGTCATAACCAATGCTGCTGAAGCTTCAAACTTCACCGTTTCAAACTTCATTGCTGGCAACTCATGGCTACCATCCACCGGTGTGCCTTTCACCGCTGGTCTCTAG 1563 0.3967 MAEMGLLFSNFLIVLFFLSTFAYGYSSNDVKHWCSQTPNPQPCEYFLSNNPNHFHKPIKHKGDFLKLLLQLAQERALIGHANTLSLHSKCHNQLERVAWNDCVKLYQLTIHKLNKILDPNTKCSKVDAQTWLSTALTNLETCKAGFYELGVQDSLLPLMSHNNLTKLLSNLLALNNKGESHQEPSYKDGFPTWVKQGDKKLLQASSPASQANVVVAKDGSGKYTTVMAAINAAPNYNSGRYVIYVKAGIYNEQVEIEANNIMLIGDGIGKTIITGSQSVGGGSTTFNSSTVGIMGEGCIAQGITFRNTAGAANQQAVALRSGSDLSVFYRCSFEGYQDTLLTLSDRQFYRECDIYGTVDFIFGNAIVVFQNCNIFVRKYPETTNTITAQGRIDAKQNTGFSFVNCVVTVAPDLKAVQSSMKAYLGRPWQKYSRTVFMKSYFDSLIVPAGWLEWNGDFALSTLYYGEYMNTGPGSSTTNRVKWGGYHVITNAAEASNFTVSNFIAGNSWLPSTGVPFTAGL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1988 520 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Ahy2g1988 520 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 177 IPR006501 GO:0004857
Ahy2g1988 520 ProSitePatterns Pectinesterase signature 1. 237 256 IPR018040 -
Ahy2g1988 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 177 IPR035513 -
Ahy2g1988 520 Gene3D - 207 520 IPR012334 -
Ahy2g1988 520 CDD PMEI-like_3 33 166 - -
Ahy2g1988 520 Pfam Plant invertase/pectin methylesterase inhibitor 29 174 IPR006501 GO:0004857
Ahy2g1988 520 Pfam Pectinesterase 212 506 IPR000070 GO:0030599|GO:0042545
Ahy2g1988 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 177 IPR035513 -
Ahy2g1988 520 SMART PMEI_2 25 174 IPR006501 GO:0004857
Ahy2g1988 520 SUPERFAMILY Pectin lyase-like 206 519 IPR011050 -
Ahy2g1988 520 PANTHER PECTINESTERASE 6 519 - -
Ahy2g1988 520 PANTHER PECTINESTERASE 6 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1988 Ahy-Chr2 94624483 94626162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1988 10 520 Carbohydrate Esterase AT2G45220 61.840 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1988 K01051 - gmx:100781697 758.829