Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1963 ATGAAGGCGATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCAACAGATCTGTTCTCACTGCTTCACCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCATCACAAGAAGGAAAGTGGAGGAGAAGGGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAGAATAAAGGCTATGTGGGTTGCACTGAGCTCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCACCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGCTGGTGGTGGCTGCTCAGCCTCTGCTGCAGCACTAACCTCAGAGAATCCTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGTGGGGCAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGCTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCGTAATGTTGATTTCGGTTCTTCAGGGTTTGGTGTTGTGGAGCAAGGAGGATTGGTTATGGACCCTTCTATGCCTGGGAATTACCCTGCTTTCCCATTCCTTGGGGCTGAGAATATGGAGAGTCACAATGCAAAGAATGGTTGTGGTGTTTCTGAACCCATGTTTGCTTCCGGTAACAATCCTATGTTGGTGTCCGCGGCTCCGACTTCGGGTGTGTTTGGCTTTCAGCAGCCTGTGTTTGGAACCGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAGCATATTGTTTACTCTCAGCAACCGGCGAAGCGTGCGGCGGTCGGGCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTCGCCAGGAGGCAGCAACAGGTGCAGCTTCCATTGTTTCCTCATCATCTGCAGCATCAGCAGAAGGTGAGTTCAGCCGGAGACGAGGCAAGCAACCAGCTTCAGCAGACTATGTTTGATCAGCTATACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCCATTGGCAAGCCTTTTCAGAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCTCCATTCAAACATTCCCAATTTCATGCCTTTCTCGCCCATCGGCTTCATATTCAAGATTGGAGCTTACAAATCATTCTCAGAGATCTCACCTGTTCTCCAGTTTGCAAACTTCACTTCCAATCAAGTCCTCATTGAAGCTGTAGAACGTTTCGATCGAATTCACATTATTGACTTTGATATTGGGTTTGGAGTGCAGTGGTCTTCCTTTATGCAAGAGCTTGCCTTGAGAAATAGCAATGCGTCTTCTCTTAAAGTTACTGCCATAGTTTCGCCTTCGAATTGTGACGAGGTTGAGCTGAATTTCACAAGAGAGAATTTAAGTCAGTATGCAAAAGACATCAACTTATCATTCGAGCTCAATATCTTGAACATTGAATCATTGAGCTCCTCTTCCTTTCCACTGGCAAGTCAGTTCTTCGATAGCGAGGCAGTTGCTGTAAATATGCCGCTTTCTTGTTTCACTCATCATCCGTCGCTGGTTCCATCGGTCCTTCATTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGACCGGAATTGTGACCGAATCGATGTGCCACTTCCAACCAAAGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTCGAATCGCTTGACGCCGTGAATGTGAACCTCGACGTCCTCCAAAAGATCGAGAAGCATTTCATCCAACCATCCATTAGGAATGTGATCACAGGTCACCACCATTACCATTCACAAGAGAAGCTACCTCATTGGAGGAACCTCTTTGTTCAATCTGGATTCTCATCATTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCGGTGCGAGGGTTTCAGGTCGAGAGAAACCATTCCTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTGGTCTCCATTTCGAGTTGGAGATGCTAA 2205 0.4694 MKAMPFPSEEFQGKGVLDFSSSYCSATDLFSLLHHQQQLVNNHSIHQPPPPSQEGKWRRREEEEEEEVEEENKGYVGCTELTSVLDSRRSQSPPSSTCTMSSSLGSSNNSTSKGSAAGGGCSASAAALTSENPPPPPEGSMEKCGGARMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSRNVDFGSSGFGVVEQGGLVMDPSMPGNYPAFPFLGAENMESHNAKNGCGVSEPMFASGNNPMLVSAAPTSGVFGFQQPVFGTVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHIVYSQQPAKRAAVGHNYQVPRLPLLDSGQEQFARRQQQVQLPLFPHHLQHQQKVSSAGDEASNQLQQTMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLLHSNIPNFMPFSPIGFIFKIGAYKSFSEISPVLQFANFTSNQVLIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSNASSLKVTAIVSPSNCDEVELNFTRENLSQYAKDINLSFELNILNIESLSSSSFPLASQFFDSEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRNVITGHHHYHSQEKLPHWRNLFVQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVERNHSSLVLCWQRKDLVSISSWRC* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1963 734 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 72 733 - -
Ahy2g1963 734 Pfam GRAS domain family 376 733 IPR005202 -
Ahy2g1963 734 MobiDBLite consensus disorder prediction 42 148 - -
Ahy2g1963 734 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 72 733 IPR005202 -
Ahy2g1963 734 ProSiteProfiles GRAS family profile. 365 733 IPR005202 -
Ahy2g1963 734 MobiDBLite consensus disorder prediction 83 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1963 Ahy-Chr2 94114425 94117527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1963 376 734 GRAS Transcription Factor Family AT4G00150 54.017 8.52e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy2g1963 GRAS 9.70E-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1963 - - aip:107625898 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2276 12 109826068 109829167 Ahy2g1963 2 94114425 94117527 hybridization