Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1962 ATGAAGGCGATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCGACAGATCTGTTCTCACTGCTTCAGCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCACCACAAGAAGAAGAAGAAAAGTGGAGGAGACGGGAAGAAGAAGAAGAAGAGAACAAAGGCTATGTGGGCTGCACTGAGCCCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCTCCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGGTGGTGGTGGTGGTGGCTGCTCAGCTTCTGCTGCAGCACTCACCTCAGAGAACCCTCCTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGCGGTACAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGTTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCACAATGTTGATTTCAGTTCGGGAGGGTTTGGTGTTGTGGATCAAGGAGGCTTGATTATGGACCCTTCTGTGCCAGGGAATTATCCTGCTTTCCCATTCCTTGGGGCTGAGAATACGGATGGTCACATTGCAAAGACCGGTGGGGTTGCTGAACCCATGTTTTCATCCGGTAACAATCCTATGTTAGCCTCCACATCTCCAGCTGCAGGTGTGTTTGGCTCTCAGCAGCCTGTGTTTGGAATTGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAACATGTTGTTTACTCTCAGCAACCAGCGAAGCGCCCTCTTTCGAATGCAACCGTCGGTCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTTGCTAGGAGGCAGCAGCAGGCCCAGCTTCCTTTGTTTCCTCATCATAGTCAGCAGCAGAAGGTGAGTTCTGCCGGAGACGAGGCGAGCAACCAGCTTCAGCAGGCTATGTTTGACCAGCTTTACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCGATCGGCAAGCCTTTTCAAAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCCCCATTCAAACATCTCCAATTTAACGGCTTTCTCACCTATCAGTTTCATATTCAAAGTTGGAGCTTATAAATCATTTTCAGAGATATCACCGGTTCTCCAGTTTGCAAACTTCACTTCTAATCAAGCCCTCATCGAAGCTGTAGAAAGGTTCGATCGAATTCACATTATTGACTTCGATATTGGGTTTGGAGTGCAGTGGTCTTCTTTTATGCAAGAGCTTGCCTTGAGAAATAGCGGTGCATCTTCTCTTAGAGTTACTGCCGTGGTATCGCCCTCAACCTGCGATGAGGTTGAGCTCAGTTTTACAAGAGAGAATTTAAGTCAATATGCAAAAGACATTAACTTATCATTTGAGCTCCATATCTTGAACATCGAATCATTGAGCTCTCCGTCCTTTCCCCTGGCTGGTCAATTCTTCGATAACGAGGCAGTTGCTGTAAATATGCCACTTTCTTGTTTCACTCATCATCCATCACTGGTTCCATCGGTCCTTCACTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGGCAGGAATTGCGACCGAAACGATGTGCCTCTTCCAACCAAGGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTCGAGTCGCTTGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAAGCACTTCATCCAACCATCTATTAGAAAAGTAATCGTGGGTCACCACCATTATCATTCACAAGAAAAGCTACCTCATTGGAGGAACCTCTTTGCTCAATCAGGATTCTCATCGTTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCCGTGCGGGGATTTCAAGTGGATCGAAATCATTCCTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTCGTGTCCATCTCGCTTTGGAGATGCTAA 2211 0.4704 MKAMPFPSEEFQGKGVLDFSSSYCSATDLFSLLQHQQQLVNNHSIHQPPPPPQEEEEKWRRREEEEEENKGYVGCTEPTSVLDSRRSQSPPSSSCTMSSSLGSSNNSTSKGSAGGGGGGCSASAAALTSENPPPPPPEGSMEKCGGTRMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSHNVDFSSGGFGVVDQGGLIMDPSVPGNYPAFPFLGAENTDGHIAKTGGVAEPMFSSGNNPMLASTSPAAGVFGSQQPVFGIVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHVVYSQQPAKRPLSNATVGHNYQVPRLPLLDSGQEQFARRQQQAQLPLFPHHSQQQKVSSAGDEASNQLQQAMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLPHSNISNLTAFSPISFIFKVGAYKSFSEISPVLQFANFTSNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGASSLRVTAVVSPSTCDEVELSFTRENLSQYAKDINLSFELHILNIESLSSPSFPLAGQFFDNEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLGRNCDRNDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRKVIVGHHHYHSQEKLPHWRNLFAQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVDRNHSSLVLCWQRKDLVSISLWRC* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1962 736 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 735 - -
Ahy2g1962 736 MobiDBLite consensus disorder prediction 42 150 - -
Ahy2g1962 736 MobiDBLite consensus disorder prediction 50 72 - -
Ahy2g1962 736 Pfam GRAS domain family 378 735 IPR005202 -
Ahy2g1962 736 MobiDBLite consensus disorder prediction 80 114 - -
Ahy2g1962 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 735 IPR005202 -
Ahy2g1962 736 ProSiteProfiles GRAS family profile. 367 735 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1962 Ahy-Chr2 94080450 94083572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1962 378 736 GRAS Transcription Factor Family AT4G00150 53.186 2.39e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy2g1962 GRAS 2.80E-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1962 - - aip:107625898 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2272 12 109784890 109788029 Ahy2g1962 2 94080450 94083572 hybridization