Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1937 ATGAAGGTTCACACATTTACTCTTGCAGTCCTTTGTTCTATGCTTTTAAGCACTACTTGCTATTGCATCAACCCCAAATTTTTCAATCCTTCAAAAGTTCCAAATGATGAAAAACCATGGGACCAAACACAAGCTACATGGTATGGAACCCCCGACGGAGCTGGATCAGAGAGTGGTGCATGTAAATATGGTAAAACTGTGGAGAATCCTCCCATCTCTAAATTGACGGCGGCTGCTGGCCATTATATTTTCCGCCAGGGCTACGGATGTGGTGCTTGTTATGAGGTGAAATGCACAGATAATGCAGCATGTTCAGGGAAGCCAGTGAGAGTGGTGGTAAGTGATGAATGCCCATCGTGTTCAGGATACCATTTCAATCTCAGTGGCGCCGCTTTTGCTTCCATCGCAAATCCAGGTCAACAAGATGCTCTTCGCAAACTTGGACAAGTCAACCTTCAATACAGAAGGGTTTCATGCTCATTTGGAGATTCTATAGCATTTATCATCGGTGAAAAATCTAGATCAGATTATTTGGAAGTATCAATGGAATACGTAAATGGAGATGCAGATGTTTATATAGAAAATACTATAAATTTCAATAACATTTCTCATGTGTGGGGTCCAACTTGGAGTGTTTTTGCTGGTGGTTATGCTCTACAACCTCCATTCAATTTTACACTCGTTCAACATTATCCCAATGGCATCAAAGGAAAGACCATTATGATTCGTGATATGATCCCAAAGGATTGGAAGATTGGTCAAGAGATAGGGGAAGAGAAAGAGAAAAAGGATTTTTGCGGCGGTTGTTCGGCGAAGGTGGAAGAAGAAGAAGAAAGAAGGGAAGAAGAAGAAGAACATGACGGTGGTGGTTCTGTAGTTCTGACGGAGACGCTAGGGGTGATGATCAATGGTGGCGCTGTGTTGGTGGTCGAGGAGAAGCTAGGGTTGGAGAAGGAGAGTCATTCAGACTTCAGAACTCTGAACTTGGTCAAGTGA 996 0.4297 MKVHTFTLAVLCSMLLSTTCYCINPKFFNPSKVPNDEKPWDQTQATWYGTPDGAGSESGACKYGKTVENPPISKLTAAAGHYIFRQGYGCGACYEVKCTDNAACSGKPVRVVVSDECPSCSGYHFNLSGAAFASIANPGQQDALRKLGQVNLQYRRVSCSFGDSIAFIIGEKSRSDYLEVSMEYVNGDADVYIENTINFNNISHVWGPTWSVFAGGYALQPPFNFTLVQHYPNGIKGKTIMIRDMIPKDWKIGQEIGEEKEKKDFCGGCSAKVEEEEERREEEEEHDGGGSVVLTETLGVMINGGAVLVVEEKLGLEKESHSDFRTLNLVK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1937 331 Pfam Expansin C-terminal domain 165 247 IPR007117 -
Ahy2g1937 331 PRINTS Expansin/Lol pI family signature 244 258 IPR007118 GO:0005576
Ahy2g1937 331 PRINTS Expansin/Lol pI family signature 57 75 IPR007118 GO:0005576
Ahy2g1937 331 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Ahy2g1937 331 PRINTS Expansin/Lol pI family signature 39 54 IPR007118 GO:0005576
Ahy2g1937 331 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Ahy2g1937 331 SUPERFAMILY Barwin-like endoglucanases 39 161 IPR036908 -
Ahy2g1937 331 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 58 164 IPR007112 -
Ahy2g1937 331 Gene3D - 27 159 IPR036908 -
Ahy2g1937 331 Gene3D - 160 255 IPR036749 -
Ahy2g1937 331 PRINTS Major pollen allergen Lol pI signature 183 198 IPR005795 GO:0005576|GO:0019953
Ahy2g1937 331 PRINTS Major pollen allergen Lol pI signature 98 108 IPR005795 GO:0005576|GO:0019953
Ahy2g1937 331 PRINTS Major pollen allergen Lol pI signature 136 151 IPR005795 GO:0005576|GO:0019953
Ahy2g1937 331 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 258 IPR007117 -
Ahy2g1937 331 PANTHER EXPANSIN-LIKE PROTEIN B1 7 254 - -
Ahy2g1937 331 SUPERFAMILY PHL pollen allergen 164 254 IPR036749 -
Ahy2g1937 331 SMART dpbb_1 76 154 IPR007112 -
Ahy2g1937 331 Pfam Lytic transglycolase 78 153 IPR009009 -
Ahy2g1937 331 PANTHER EXPANSIN-B3 7 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1937 Ahy-Chr2 93538120 93546155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1937 21 253 Expansin Gene Family AT1G65680 37.603 1.29e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1937 - - ahf:112728471 649.047