Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1927 ATGGCGGCATCATTGGTAGGAGGAGCTGCCATAGGAGCTGTGTTTGGAGAACTCTTGAAAGCAGTCATAGATATGAGAGACAGAGCTGTTATGTTCAAACCAACCTTAGCTTACCTCACAACAACGTTAACAGCAATAGATCCTGTGATCAAGGAGATAGAACAACAAAACAATGAACTGGGTCGCGCGAACACCGAGCTAGAGTTGTTGATCAAGGAAATGGAAGAAGGCACAAAGCTTGTTTACAAGTGTTCCAAAATCCACAAGCTGAATTTTCCAGCTAGGATTCGGTACCAAGAACAATTGGTAGCACTGGTGGAGTCTCTGGTGAGGTTCTTTATCATTGATATGCAGGCTCAGACCGCCAGAGATTTGAAAGAGACGCTGATGAAGGTTAGACGAATACATAGCGCGGTTAATAAGATGCAATCGAATAGCAATGATGAAGAAACTGGTGGTGGTGGTATAGTTTCTGAAGATTCTGATTCTGGTTCTGCTAATGTAGCTGTGGAGGCGAATCAGATGGACTTAACTGATGAGACTACTGTCACAATTCAGCAAAATGATGAGTGTGTCACGGAAATAACTAACTCCGTTCCAGTAATAGCTAACTCTGTTCCAGAAACAGCCGTCGAGCCAAAGATCCTTCGGAATAATTCCTTGGAGCAAGTCATGGAAGATCTCTTGCACCTTGTTAGCCAAAATAAGGAAAAAGCAAATAATAGTCAAGAAGAAAAGCATTTGACGACTATCAAATCCTATGATCAATCATATCCAGATAGGAAAAGATTCATGGGAACAACCAAAGATAGAGAGAACCCATTAGATTGGGATTCAAGAATGAAGATTTTACTTGGAGTTGCCAAGGGTCTTGCTCATATCCACTCTCTGGATGGAGGAAATTATGTCCATGGCAATATAAGATCATCCAATGTGCTTGTCACAAATGATCACCAAGGTTGCATATCAGATCTTTCAATGACTTATTCATTAAGTATCTCCTTCCCCCAATTTAGAAACACGGGTTACCAAGACAGAGATTTCTGTTTTGGAAGAAAGGAAAAAGTGAACGTACTGACCCAAAAATGTGATGTGTATAGCTTTGGTGTTCTTCTTTTTGAGATGCTAACAGGAAGAGTGCCATCAGAGTATAATGATGCTCTACCATGGGATGTTTACCTTGATGTTAAGGACGGCATTCCTGTGTTTGATAGTGCCATTGGTGATAATATACAGGATGCCTGGAAGATGAAGGAATTGGCAGATGAATGTGCGTCACTAGTACCTAGTAAAAGTCCATCCATGGATGAGGTTGTTAGGAGAATGGAAAAAATAAGAGCATCCTAG 1347 0.4113 MAASLVGGAAIGAVFGELLKAVIDMRDRAVMFKPTLAYLTTTLTAIDPVIKEIEQQNNELGRANTELELLIKEMEEGTKLVYKCSKIHKLNFPARIRYQEQLVALVESLVRFFIIDMQAQTARDLKETLMKVRRIHSAVNKMQSNSNDEETGGGGIVSEDSDSGSANVAVEANQMDLTDETTVTIQQNDECVTEITNSVPVIANSVPETAVEPKILRNNSLEQVMEDLLHLVSQNKEKANNSQEEKHLTTIKSYDQSYPDRKRFMGTTKDRENPLDWDSRMKILLGVAKGLAHIHSLDGGNYVHGNIRSSNVLVTNDHQGCISDLSMTYSLSISFPQFRNTGYQDRDFCFGRKEKVNVLTQKCDVYSFGVLLFEMLTGRVPSEYNDALPWDVYLDVKDGIPVFDSAIGDNIQDAWKMKELADECASLVPSKSPSMDEVVRRMEKIRAS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1927 448 Pfam Protein tyrosine and serine/threonine kinase 228 441 IPR001245 GO:0004672|GO:0006468
Ahy2g1927 448 MobiDBLite consensus disorder prediction 143 163 - -
Ahy2g1927 448 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Ahy2g1927 448 Coils Coil 50 73 - -
Ahy2g1927 448 SMART tyrkin_6 129 442 IPR020635 GO:0004713|GO:0006468
Ahy2g1927 448 Gene3D Transferase(Phosphotransferase) domain 1 265 448 - -
Ahy2g1927 448 PANTHER LRR RECEPTOR-LIKE KINASE 267 448 - -
Ahy2g1927 448 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 135 IPR008808 -
Ahy2g1927 448 ProSiteProfiles Protein kinase domain profile. 143 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1927 448 PANTHER OS05G0588300 PROTEIN 267 448 - -
Ahy2g1927 448 SUPERFAMILY Protein kinase-like (PK-like) 272 442 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1927 Ahy-Chr2 93213002 93217810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1927 266 448 Receptor kinase-like Gene Family AT5G58300 39.378 3.04e-32 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy2g1927 PK_Tyr_Ser-Thr 6.60E-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1927 - - ahf:112751694 504.212