Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1879 ATGTCTTTCACTACTTTCAGTGGCTTACTTTCAAGAAGGTACAACAACACGAGCATGGTTGATGATAATTGTTGGGAAACTTCTATACCTAGAACTGGTGATGATAATCACGGTGAATTTTTTTCATCAATAATTTACCCTTCTTACTCTGATTTCCCACCTGGTTTCAATCCCAATGAGTTCTTGGATGCATTTCTTTCTGAATCAAATGGAGACCCACAAAGAAAGCAGGACACATTTACAATCCTTGAATCTGGCATGCTTGTTGATTTTTCATCGCCGATGACAAATACAACAAATTTTCAAGATCCATATCTCCGCAACTTCTCTGAAATGGCCTTAGCCGTTCCCGAAATACATAGCACTTTAGCTCCTCAACTAAATTGTCATAAATCTATTAACGAAGATGAGGACGGAGATCTAAACGATGGATACAATTGGAGGAAATATGGAGAGAAACGGACGAAAGGAGGCGAAAATCCCCGGAGTTATTACAGGTGCGGAGAACCAAATTGCACGATGAAGAAGAAAGTTGGGAGAAACTTGGATGGAAAAATCATTGCCATTATGTACAAGGGAAATCACAACCATCCCAACCCTTCTAAACCTGTTGGAAGTGCAAATGTTCCATTAGTTAATGAACTTTATGCATCATCATACACCGACTCGGGGAATTTGAATCAACAATCTGTTGGAGGTGTTGAAAATCAACTTGGAGCACACACCAAAAGATTGAAAGGAGGGAATGGAATCTATAGCTATTTGTTTAATCCGAGTGGGGGCAGAGCTATAAAGGAACCCAGAGTTGTAGTTCAAACTACAACTGAAATTGACATTCTTGACGATGGCTATAGGTGGAGGAAATATGGCCAGAAAGTTGTTAAGGGAAACCCAAACCCAAGGAACTACTACAAGTGTGTGAGTCCAGGTTGTAACGTGAAGAAACATGTGGAGAGAGCTGCAGATGACATAAAGTCTGTGATGACAACCTATGAAGGCAAACACAACCATGATGTTCCTCAAGAAAGATCATCCTTTGCATCTCGCATAGCATCACTCACCAACAACTTTGCAACCCCATCATCATCATCGTCACCTTCTCTTCATGACACAAGCCTATCACTATCTTCACCAAGGGCCAACAATGAAAATCAAGCAAGTCAAGAACTTACTACTCTTCCCTTCATTGTTGGAATTCCAAATTTTGGTAGGTCACTGATTGGTACTTCATATGCCAATGAGGGACCAAGCTCAAACAATGAAGAGAAGAAGGATTAG 1278 0.4053 MSFTTFSGLLSRRYNNTSMVDDNCWETSIPRTGDDNHGEFFSSIIYPSYSDFPPGFNPNEFLDAFLSESNGDPQRKQDTFTILESGMLVDFSSPMTNTTNFQDPYLRNFSEMALAVPEIHSTLAPQLNCHKSINEDEDGDLNDGYNWRKYGEKRTKGGENPRSYYRCGEPNCTMKKKVGRNLDGKIIAIMYKGNHNHPNPSKPVGSANVPLVNELYASSYTDSGNLNQQSVGGVENQLGAHTKRLKGGNGIYSYLFNPSGGRAIKEPRVVVQTTTEIDILDDGYRWRKYGQKVVKGNPNPRNYYKCVSPGCNVKKHVERAADDIKSVMTTYEGKHNHDVPQERSSFASRIASLTNNFATPSSSSSPSLHDTSLSLSSPRANNENQASQELTTLPFIVGIPNFGRSLIGTSYANEGPSSNNEEKKD* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1879 425 SUPERFAMILY WRKY DNA-binding domain 140 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 SUPERFAMILY WRKY DNA-binding domain 272 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 ProSiteProfiles WRKY domain profile. 136 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 SMART WRKY_cls 280 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 SMART WRKY_cls 141 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 363 IPR044810 GO:0003700
Ahy2g1879 425 MobiDBLite consensus disorder prediction 357 386 - -
Ahy2g1879 425 Pfam WRKY DNA -binding domain 281 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 Pfam WRKY DNA -binding domain 142 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 ProSiteProfiles WRKY domain profile. 275 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 Gene3D WRKY domain 129 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 Gene3D WRKY domain 265 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g1879 425 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 72 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1879 Ahy-Chr2 92230595 92237665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1879 132 366 WRKY Transcription Factor Family AT2G38470 47.464 5.52e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy2g1879 WRKY 1.30E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1879 K13424 - gmx:102666898 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2143 12 106870192 106876334 Ahy2g1879 2 92230595 92237665 hybridization