Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1869 ATGAAATCAAGCACACCATTGAAAGCCTTGAGTGGTAATAGTAGTAGTAGTGTTCATCATGACAATGATATTATTCCATTTCTTCATCATGAGTATGGTGGTAACATGATGAATAAGGTTACTACTAGTTATAGTTTTAATAACCCTTCTATGTGTCGATTAGGGCTTCCTTTAACAGCCATAGATAGGTTCTTATGTAGCCAACAACAAAGCCAAGTCCCTCATAGGAAACACCAACAACACAATGATGATGATGTTGCAAAGAATAATAATGTTAGTGTTTTTGATGAAGATTTCCACACTAGGTTTTCTAATTGTTATTATGGTGGTGCTTCAAATAACCCTTATTATAAGTTTGAGTGGCCTAATTGCACTTCTCAAGAAGCAAGCCTTGTTGTTGATGATGATCATGATCATCACCTCTTAGCAATTAGTAGTGATGATCAAGAAGAGGGTTTCAATTGGCTACAAAAATTCCTCACATTGTGTCACAATAAAGAAGATGTTCAAGCTTTAGGGGAAAATCTCAAAATTAGGGGAAGGAACCCTAAGAAAATTTCTTCTATATCCTTGATCAAAGGACAATGGACTCCTGAGGAAGACAGGAAATTGGAGAAGCTAGTGAAGCAACATGGTATAAGGAAGTGGTCACAAATAGCTGAGAAATTGGAGGGAAGGGTTGGGAAGCAGTGTAGAGAGAGGTGGCATAATCATCTCCGCCCTGATATTAAGAAAGATGGTTGGAGTGAAGAAGAAGAGAGGATTTTGGTAGAAACTCACATGAAGGTCGGAAACCGTTGGGCTGAAATCGCGAAGCGAATACCCGGACGAACCGAAAACTCGATCAAAAACCATTGGAACGCAACAAAAAGAAGACAGAACTCAAGGAGAAAGAACAAGAAGCCATCATCATCATCAACCACCTCAAACAATAATGGCAAACCCCAATCTTCAATTCTTGAAGACTACATTAGAAGCAAAACCCTAATTGGTACCAATAATATCACTGCTCCTATTACTACTACCACTACTAATTCAACACCAACTATTACTAGTGAATCTGAATCTATCACTAATAATAGTGATAATAATAATAATAATCCATATTATTCATCACCAACAATCATAGCTGAATCATCGTATGATGATGAGTTACTCTTCATGCAACAACTTTTCAAAGAGAATAATCAAATTGTCAATGGAGATGCTGTTATTAAGAACACTAACGATGAATGTGGTGATGGGGAACATGCACAACTCCATCATCAATTGATGAACAATAATAATGGAGGTGCAACAAGTTCATCATCATCACTTTGCAATAATCATGAGGCTTATGAGAAGAATCACAACATGGATTTTCATTTAAGATTCAAGACTGTATGTTCAGCTGTGAAGAATAGGGAGATGGATCTGTTAGAGTGA 1425 0.3698 MKSSTPLKALSGNSSSSVHHDNDIIPFLHHEYGGNMMNKVTTSYSFNNPSMCRLGLPLTAIDRFLCSQQQSQVPHRKHQQHNDDDVAKNNNVSVFDEDFHTRFSNCYYGGASNNPYYKFEWPNCTSQEASLVVDDDHDHHLLAISSDDQEEGFNWLQKFLTLCHNKEDVQALGENLKIRGRNPKKISSISLIKGQWTPEEDRKLEKLVKQHGIRKWSQIAEKLEGRVGKQCRERWHNHLRPDIKKDGWSEEEERILVETHMKVGNRWAEIAKRIPGRTENSIKNHWNATKRRQNSRRKNKKPSSSSTTSNNNGKPQSSILEDYIRSKTLIGTNNITAPITTTTTNSTPTITSESESITNNSDNNNNNPYYSSPTIIAESSYDDELLFMQQLFKENNQIVNGDAVIKNTNDECGDGEHAQLHHQLMNNNNGGATSSSSSLCNNHEAYEKNHNMDFHLRFKTVCSAVKNREMDLLE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1869 474 CDD SANT 248 290 IPR001005 -
Ahy2g1869 474 Gene3D - 192 244 - -
Ahy2g1869 474 MobiDBLite consensus disorder prediction 339 366 - -
Ahy2g1869 474 PANTHER MYB PROTEIN-RELATED 95 448 - -
Ahy2g1869 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 294 IPR017930 -
Ahy2g1869 474 PANTHER TRANSCRIPTION FACTOR MYB119-RELATED 95 448 - -
Ahy2g1869 474 Pfam Myb-like DNA-binding domain 196 253 - -
Ahy2g1869 474 SMART sant 244 292 IPR001005 -
Ahy2g1869 474 SMART sant 192 241 IPR001005 -
Ahy2g1869 474 SUPERFAMILY Homeodomain-like 190 286 IPR009057 -
Ahy2g1869 474 MobiDBLite consensus disorder prediction 300 319 - -
Ahy2g1869 474 Gene3D - 247 318 - -
Ahy2g1869 474 ProSiteProfiles Myb-like domain profile. 188 239 IPR001005 -
Ahy2g1869 474 CDD SANT 196 239 IPR001005 -
Ahy2g1869 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 243 IPR017930 -
Ahy2g1869 474 MobiDBLite consensus disorder prediction 276 319 - -
Ahy2g1869 474 ProSiteProfiles Myb-like domain profile. 240 290 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1869 Ahy-Chr2 92010400 92013260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1869 184 412 MYB Transcription Factor Family AT5G58850 53.879 6.58e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy2g1869 Myb_DNA-bind_6 1.20E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1869 K09422 - gmx:100786295 296.589