Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1804 ATGGACATGGACGTCGACGGAGCTTCTCGACCCAAAGAGGGAAAGGCCATTTTGGTCATTTTAGTGGGAGCACCGGGAAGTGGCAAATCAACTTTCTGTGAAGAAGTGATGCGTTCTTCAACTCGCCCTTGGATTCGCGTTTGCCAGGACACCATTGGAAATGGTAAAGCAGGAAGTAAAGCTCAATGCCTGAGCAGTGCAGCTAGTGCATTAAAGGATCATAAGAGTGTGTTTATTGATAGGTGCAATCTTGACAGAGAGCAGCGCTCCGAATTCGTAAAGCTAGGTGATGTGCACAAAATAGATGTGCATGCAGTTGTGCTTGATCTTCCTGCTAAACTTTGTATTTCTCGATCCGTTAAACGGACTGGCCATGAAGGAAACCTTCAGGGTGGAAAAGCTGCAGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGCTGCCCAAATTAAGCGAAGGCTATAGCCGGATAACATTTTGTCAGAGTGAAAGTGATGTCAAAGGTGCCATTAGTACATACGGCTCACTTGGGCCACTGGATAACCTCCCACATGGCTGCTTTGGCCAGAAAAATCCAGATTCAAAAGTTCAAGTTGGTATAATGAAGTTCCTAAAAAAGGTGCCAGCCCCTGATGCAGCAGCAAGACCTGATGGAAGTGGAGACACTACGTCCCAAAATCCTGGGAAAAATGATTATTTCCACAAAGATGTAGAAATGGCATCCCCAATTCTAGATAATCCCAACTTAGAGTCAAAGGAAGGAGAAAGCCAGGGAGTGGCCTTCGATGGTTCCCATGCCAGTCGATTTTCTCTGGATGATGCTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTCAATTATGAAAAGGCAGCTGATATTATTGTTGAGAAGGTTGCAGAGTTTACAGCTAAGCTTGGCAATGCTAGACTTGTGCTGGTTGATTTGACTCATAAATCAAAGATTCTTTCCTTGGTTAAAGCCAAAGCATCTGAAAAACACATTGACACCCAAAAGTTTCTTACCCATGTCGGTGACATTACTAAACTTCATTCTACAGGAGGTTTAAACTGTAATGTCATAGCTAATGCTGCCAACTGGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCCATTTTTAATGCTGCGGGTCCTGAACTGGAGTCTGCAACCAAAGAAAGAGCAAAATCTCTTTCACCTGGAAATGCTGTTGTTGTCCCTCTACCTGCATCTTCTCCTTTGTTTGTTACAGAGGGTGTAACCCATGTCATACATGTTCTTGGACCTAATATGAACCCTCAAAGGCCAAATTGTCTCAACAATGATTATGAAAAAGGATGCAAAATTCTTCAAGATGCTTATGCTTCCCTATTTGAAGGCTTTGCATCAATTGTGAGGACCCAGGCAGGGCAATCTAGAGAAGAAAATGAAAACATTGTAAAAAAGGCTTTGAAATTGCAGGATAAATCTGAATGTCATTCCAGAAATAATTTGACAAATATTGATCAAAAGAATAAGAGAGATGCTGATCATGGGTCTGAGAAGAGCAAAAAATGTAAGGGAATTCAGGATAGTTTTGGAGTGAGCTCTGATTCCAGAGATGAAAGGGTAGATTCGGAGCATAGAAGAAATGGTGGGAGCATGAATAAGGCATGGGGATCATGGGCACAAGCTCTTCATCAAATGGCTATGCATCCTGAGAAACATAAAGATGACTTGCTTGAGATTTCAGAGGATGTTGTTGTTCTGAATGATCTCTATCCTAAGGCAAAGAAACATGTTCTCATTTTGTCTCGTACCAGAGGAGTTGATTGCCTGGAAGATGTCCAGAAAGAACACTTTCAGTTGCTGAAGAAGATGCATGATGTGGGTTTAAAGTGGGCCAGGAAGCTCCTAGATGAGAATGCTTCACTGGTCTTTCGCCTTGGATATCACTCAGCTCCGTCAATGCGACAACTGCATTTACATGTTATCAGCCAGGACTTTGATTCAAAACATATGAAGAACAAGAAGCACTGGAACTCATTCAACACTGCTTTCTTTCGCGACTCGATAGACGTAATGGACGAGGTCTCTAGTCATGGGAAAGCAACACTGAAAGATGATGATAAGCTGTTGTCCATGGAGTTGAGGTGCCACAGATGTAGAAGTGCGCATCCAAACATACCCCGGTTGAAATCGCATATTGGCAGCTGCAAAGCTCCTTTTCCTGCTTACTTACTTGAAAATGGACGTCTGGTGTTCAGCTAA 2262 0.4284 MDMDVDGASRPKEGKAILVILVGAPGSGKSTFCEEVMRSSTRPWIRVCQDTIGNGKAGSKAQCLSSAASALKDHKSVFIDRCNLDREQRSEFVKLGDVHKIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGYSRITFCQSESDVKGAISTYGSLGPLDNLPHGCFGQKNPDSKVQVGIMKFLKKVPAPDAAARPDGSGDTTSQNPGKNDYFHKDVEMASPILDNPNLESKEGESQGVAFDGSHASRFSLDDAPTLAFPSISTSDFQFNYEKAADIIVEKVAEFTAKLGNARLVLVDLTHKSKILSLVKAKASEKHIDTQKFLTHVGDITKLHSTGGLNCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKERAKSLSPGNAVVVPLPASSPLFVTEGVTHVIHVLGPNMNPQRPNCLNNDYEKGCKILQDAYASLFEGFASIVRTQAGQSREENENIVKKALKLQDKSECHSRNNLTNIDQKNKRDADHGSEKSKKCKGIQDSFGVSSDSRDERVDSEHRRNGGSMNKAWGSWAQALHQMAMHPEKHKDDLLEISEDVVVLNDLYPKAKKHVLILSRTRGVDCLEDVQKEHFQLLKKMHDVGLKWARKLLDENASLVFRLGYHSAPSMRQLHLHVISQDFDSKHMKNKKHWNSFNTAFFRDSIDVMDEVSSHGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHIGSCKAPFPAYLLENGRLVFS* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1804 753 PANTHER APRATAXIN 16 751 IPR026963 GO:0003677|GO:0006281|GO:0033699
Ahy2g1804 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 160 IPR027417 -
Ahy2g1804 753 Pfam Scavenger mRNA decapping enzyme C-term binding 570 676 - -
Ahy2g1804 753 Gene3D - 558 738 IPR036265 -
Ahy2g1804 753 Pfam C2HE / C2H2 / C2HC zinc-binding finger 681 733 IPR032566 -
Ahy2g1804 753 PANTHER APRATAXIN-RELATED 16 751 - -
Ahy2g1804 753 MobiDBLite consensus disorder prediction 533 549 - -
Ahy2g1804 753 Pfam AAA domain 18 144 - -
Ahy2g1804 753 Pfam Macro domain 365 442 IPR002589 -
Ahy2g1804 753 SUPERFAMILY Macro domain-like 324 463 IPR043472 -
Ahy2g1804 753 Gene3D Leucine Aminopeptidase, subunit E, domain 1 316 470 IPR043472 -
Ahy2g1804 753 ProSiteProfiles Macro domain profile. 330 506 IPR002589 -
Ahy2g1804 753 SUPERFAMILY HIT-like 560 720 IPR036265 -
Ahy2g1804 753 ProSitePatterns HIT domain signature. 645 663 IPR019808 -
Ahy2g1804 753 MobiDBLite consensus disorder prediction 504 525 - -
Ahy2g1804 753 Gene3D - 6 172 IPR027417 -
Ahy2g1804 753 MobiDBLite consensus disorder prediction 210 232 - -
Ahy2g1804 753 MobiDBLite consensus disorder prediction 498 553 - -
Ahy2g1804 753 SMART YBR022w_8 342 484 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1804 Ahy-Chr2 90807960 90814008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1804 13 751 C2H2 Transcription Factor Family AT5G01310 59.269 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1804 K10863 - gmx:100786762 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2069 12 105114460 105119115 Ahy2g1804 2 90807960 90814008 hybridization