Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1801 ATGAACCTCACTCTCTATCACTTAGGAATGGAGGGTTCAAAATCATTTGGAATAAAGCAAGAAGGGTATCATAATCCTTCATCCATCATGAAAACAGAGGAATTCTCGCTCCGACGCAGCAAAGTGAAGCAAGCATTGATGATATTTCGGAACTTGTTTTCAAAACTCTTTAGCGAGTACAAAACAGATCACTATGATAATGTGAAAGCAAAATTTAAAGCTTTGAATGATGCTGCAATGTTGATGCAGAGGAAGCATCAATGGGTGAACTGCCGAAAACGGGTGGGGCATGTCCCCGGGATTGAAGTTGGAGACCGATTTCAGTATAGGAATGAACTCAATGTCGTCGGCCTCCATCGCCAGTTTGTCAATGGAATCGATTACGTGGGGAAGGGCAAGAACTCTTTAGCCACAAGCATTGTTGTAACCAATCGCTACGATAATGCTAGAAATCATGGTGGTTCATTGGTTTATAGTGGTCATGGATGGAATCCTAATGTGAAAGGTGGATCTATGCCCCGTGATCAAAAGTTGGCCGGCGGAAATCTTGCTTTGAAGAATAGCATGGATGCTAAGAGTCCCGTGCGGGTTATATTGAAGGTTGATGGAAAATCTGGTGGAGGCATAGAGAAGAAAACCAATGATAAATTCTCATATATATATGATGGATTGTATTTGGTTGAGAAGATGATACAAGAAAGAGGAACTCATGGGAAACTTGTATTCAAGTTTTTGTTGAACAAACTTGAAGAGCTACCTTCAACTTGTGTTCCCCCCAAGGATGAGGTTATCAAGAATGTCAACAAATTTGGGCAACTTGATATTTTCACCTTGAGGAAAAGGCTCAAAACTAAAGGTTGTGCAACTAAAAATGATGTTATTATCATGAATGATATCTCTAACGGACAAGAGAAGTTTCCTATTCGAGTCGTTGCATCAACTGATGGTATTAAAAGGCCTCCATCTTTTGATTACATAGTAAACAACATTTATGTTGATAGCTTCGAGAAGCCAATGTTATGTGGTTGTGACTGTGTAAATGGATGTGTGGATTGGGAGAAATGTGTCTGTATTGTTAAGAATGGTGGAACAATACCATATGACTCTAAGAAAAGACTTGCTTCTGGATTGGAATCACGTGTTATATACGAGTGCGGCTCTTCTTGCAAGTGTTCCTCATCTTGCTACAACCGATTAAGTCAACATGGCCTTCAATTCCAACTTGAAATATTCAACTCCGAATCAAAGGGCTGGGGTGTTAGAACGCGCTCTTTCATTCCTGCTGGAAGCTTTGTTTGTGAGTACATTGGTGAAGTCCATCATCATAGAGAAGCTGGATCTAGGCAAAAAGTTGATAGTTATGTTGTAACTATGGTTGTTGAAAAGTGTTTCATTGATGCTACAAGACGCGGAAACATTGGAAGATTCATAAACCATAGCTGTTGTCCTAATCTTCAAGTCATGGAGGTTATGTATGATGACAATGATAAGAACCTTCCCCATAAAATCTTTTTTGCATTACAGGACATACCTGCTGGAAGAGAGCTGAGTTTTGATTACAACATCTGCAAGCCAAGGGTTATCGGGACTGGCAGCAACATTTGCCAATGTGGTTCGCCCAAATGCGTTGGGCGAATTTACATTTAA 1647 0.4019 MNLTLYHLGMEGSKSFGIKQEGYHNPSSIMKTEEFSLRRSKVKQALMIFRNLFSKLFSEYKTDHYDNVKAKFKALNDAAMLMQRKHQWVNCRKRVGHVPGIEVGDRFQYRNELNVVGLHRQFVNGIDYVGKGKNSLATSIVVTNRYDNARNHGGSLVYSGHGWNPNVKGGSMPRDQKLAGGNLALKNSMDAKSPVRVILKVDGKSGGGIEKKTNDKFSYIYDGLYLVEKMIQERGTHGKLVFKFLLNKLEELPSTCVPPKDEVIKNVNKFGQLDIFTLRKRLKTKGCATKNDVIIMNDISNGQEKFPIRVVASTDGIKRPPSFDYIVNNIYVDSFEKPMLCGCDCVNGCVDWEKCVCIVKNGGTIPYDSKKRLASGLESRVIYECGSSCKCSSSCYNRLSQHGLQFQLEIFNSESKGWGVRTRSFIPAGSFVCEYIGEVHHHREAGSRQKVDSYVVTMVVEKCFIDATRRGNIGRFINHSCCPNLQVMEVMYDDNDKNLPHKIFFALQDIPAGRELSFDYNICKPRVIGTGSNICQCGSPKCVGRIYI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1801 548 ProSiteProfiles SET domain profile. 406 521 IPR001214 GO:0005515
Ahy2g1801 548 ProSiteProfiles YDG domain profile. 96 248 IPR003105 -
Ahy2g1801 548 Pfam SAD/SRA domain 95 250 IPR003105 -
Ahy2g1801 548 SMART preset_2 296 390 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy2g1801 548 SUPERFAMILY SET domain 288 527 IPR046341 -
Ahy2g1801 548 Pfam SET domain 417 521 IPR001214 GO:0005515
Ahy2g1801 548 ProSiteProfiles Pre-SET domain profile. 341 403 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy2g1801 548 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 27 545 - -
Ahy2g1801 548 Gene3D - 77 270 IPR036987 -
Ahy2g1801 548 Gene3D SET domain 273 526 IPR046341 -
Ahy2g1801 548 SMART set_7 406 527 IPR001214 GO:0005515
Ahy2g1801 548 Pfam Pre-SET motif 299 398 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy2g1801 548 SUPERFAMILY PUA domain-like 78 254 IPR015947 -
Ahy2g1801 548 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 27 545 - -
Ahy2g1801 548 SMART G9a_1 91 252 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1801 Ahy-Chr2 90751339 90754496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1801 74 544 Su(var)3-9 homologs AT1G73100 35.088 2.85e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy2g1801 SAD_SRA 4.00E-41 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1801 - K11420 aip:107627681 816.994