Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy2g1760 | ATGGCTGTTATAACCACAACAAGGAGGAGTGAACGTTTCCGGCGAACAACACCACCGACATGTAAGTATTGGCTAGCTGGGAGATGCAACCGAAATCCTTGTAGATTTTCGCATAGCTCACCAACATTGCCATCGAATGCATACTATAATGGCAATACCACATATAAGCATTCAAAGCAACCAACAAATTGCGCATCGAAGACCCTCGAGAAGCCAGCAAATCGTGCACCAATGGCTGTTGTGTCTGTTGAGAAGCCAACCAAGTGTGAACCAATGGCTATGTCTGATGAGAAGATTACAGTGTGTGGACTAGAGGCTGTGTCCGTTGAGGAGCCAACCAAGTGTGTACAAAAGGCTGTATTAATTGAAAAGACTGCAGATGTGGAAGATGTGGACACCGTTATTGCTGAGGCTCCTGTGGAGAAATCACGAAGTATTTGTAAATATTGGATGACTGACACTTGTGTGCATGGTGACCTGTGCCAGAATTTGCATTCATGGTTTTATGGTGATGGGTTTTCTACACTTGCAAGGCTTCATGAACACAAGAAGGCTGTAACCGGGATTGCATTGCCGGCTGGTTCGGACAAACTTTATTCTGGCAGCACTGATGGCACAGTTCGGGCGTGGGACTGCAACACTGGCCGCTGTCTTGGTGTGATAAACCTTAATTCTGAAGTAACCTCGTTGGTATCTGAGGGCTCATGGATATTTGCCGGTGTGAAGAATGCTGTGAAGGCATGGAATATTCAAACCGGTGCAGATTTTACTCTTGATGGACCTATGGGGCAAGTCCTGTCCTTGAATGTTGGCAATGATATCCTCCTTGCTGGAGCAGAGGATGGTGTTATTTATGCTTGGAGAGTCAGCTCTGATCCCAAAGCTGAGTCTCCTTTCGAACTGGTTGCAACACTGAGTGGTCATACTAAACCGGTGGTTTGTCTTGCTATTGGATGCTACAAGATGCTTTATTCTGGGTCCATGGACCATAGCATTAAGGTTTGGGACCTTGATACATTACAGTGCACAATGACACTTAATGGACATTCTGACGTAGTCACATCACTTATTTGTTGGGACCATTACTTGTTATCGAGTTCTTCTGATTGCACGGTCAATGTTTGGGTGTGCACTGAGGAGGGAATTCTGAAGGTGGCATACACTCACACTGAAAAAAATGCTGTTCTTGGACTGTATGGGATGACTGATGCAGAGGCGAAACCAATATTGTTCTGCTCGTGCAAAGGCAATTCAGTTCGTATGTATGAATTGCCGACGTTTTTAGAGAGAGGTCGATTGTTTACAAGACAAGAAATTCGATCCTTTGAGATAGGCCCTAACGGACTCTTCTTTACTGGAGATGGGACTGGTTTGTTGAATGTGTGGAAATGGTTGGAAGAGCCTAAGGTGCCATGCTCCTGA | 1422 | 0.4529 | MAVITTTRRSERFRRTTPPTCKYWLAGRCNRNPCRFSHSSPTLPSNAYYNGNTTYKHSKQPTNCASKTLEKPANRAPMAVVSVEKPTKCEPMAMSDEKITVCGLEAVSVEEPTKCVQKAVLIEKTADVEDVDTVIAEAPVEKSRSICKYWMTDTCVHGDLCQNLHSWFYGDGFSTLARLHEHKKAVTGIALPAGSDKLYSGSTDGTVRAWDCNTGRCLGVINLNSEVTSLVSEGSWIFAGVKNAVKAWNIQTGADFTLDGPMGQVLSLNVGNDILLAGAEDGVIYAWRVSSDPKAESPFELVATLSGHTKPVVCLAIGCYKMLYSGSMDHSIKVWDLDTLQCTMTLNGHSDVVTSLICWDHYLLSSSSDCTVNVWVCTEEGILKVAYTHTEKNAVLGLYGMTDAEAKPILFCSCKGNSVRMYELPTFLERGRLFTRQEIRSFEIGPNGLFFTGDGTGLLNVWKWLEEPKVPCS* | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy2g1760 | 473 | ProSiteProfiles | Zinc finger C3H1-type profile. | 15 | 41 | IPR000571 | GO:0046872 | |
Ahy2g1760 | 473 | SUPERFAMILY | WD40 repeat-like | 174 | 466 | IPR036322 | GO:0005515 | |
Ahy2g1760 | 473 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 48-LIKE ISOFORM X1 | 13 | 470 | - | - | |
Ahy2g1760 | 473 | SMART | WD40_4 | 426 | 463 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | SMART | WD40_4 | 339 | 376 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | SMART | WD40_4 | 251 | 288 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | SMART | WD40_4 | 298 | 336 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | SMART | WD40_4 | 172 | 211 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 179 | 211 | - | - | |
Ahy2g1760 | 473 | SMART | c3hfinal6 | 142 | 167 | IPR000571 | GO:0046872 | |
Ahy2g1760 | 473 | SMART | c3hfinal6 | 15 | 40 | IPR000571 | GO:0046872 | |
Ahy2g1760 | 473 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 305 | 339 | - | - | |
Ahy2g1760 | 473 | Gene3D | - | 158 | 296 | IPR015943 | GO:0005515 | |
Ahy2g1760 | 473 | Gene3D | - | 297 | 471 | IPR015943 | GO:0005515 | |
Ahy2g1760 | 473 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 179 | 220 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 346 | 375 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | PRINTS | G protein beta WD-40 repeat signature | 323 | 337 | IPR020472 | - | |
Ahy2g1760 | 473 | PRINTS | G protein beta WD-40 repeat signature | 363 | 377 | IPR020472 | - | |
Ahy2g1760 | 473 | PRINTS | G protein beta WD-40 repeat signature | 198 | 212 | IPR020472 | - | |
Ahy2g1760 | 473 | Pfam | WD domain, G-beta repeat | 300 | 336 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | Pfam | WD domain, G-beta repeat | 341 | 375 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | Pfam | WD domain, G-beta repeat | 176 | 211 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 305 | 345 | IPR001680 | GO:0005515 | |
Ahy2g1760 | 473 | ProSiteProfiles | Zinc finger C3H1-type profile. | 141 | 168 | IPR000571 | GO:0046872 | |
Ahy2g1760 | 473 | SUPERFAMILY | CCCH zinc finger | 141 | 166 | IPR036855 | GO:0046872 | |
Ahy2g1760 | 473 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 323 | 337 | IPR019775 | - | |
Ahy2g1760 | 473 | PANTHER | - | 13 | 470 | IPR044715 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy2g1760 | Ahy-Chr2 | 89735803 | 89738931 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy2g1760 | 182 | 395 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 23.276 | 1.64e-07 | 51.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Ahy2g1760 | WD40 | 1.60E-05 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy2g1760 | - | - | ahf:112726849 | 769.615 |