Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1752 ATGAATCAATTGGGAAGTAGAAGTCAAGCTTCTCCATCTTCAACAAACAAGAAGAAGATTGAGAGAAGGGTCATTGAGAAAAACAGAAGGAACCACATGAAGATGCTCTACTCCAAACTCAACTCTCTTCTCCCTAGGCCCAAGGAACCGTTGCCATTACCTGATCAAGTGGACAAGGTCATAAACTACATAAAGAGCTTAGAGGAGAAGGTGAAGATGGCTAAAGAAAAGAGAGAGAGGTCGTTGGGAATTGGAATCCGAAGAAAGAGGACGCGTGGTGATTGCAGCGGTGTTGATCGCCAGAAACCGCCACAACTTGAGGTTCATGAAATAGGTTCGTGTGTTGAAATTGAAATGACATGTGGATTAGATACTCAGTTCATATTCTATGAAATCATTCGTATTCTGAATGAAGAGAATATTGATGTCAAGAGTGTCAATTCCTCACTCATCGAGAATTCCATGTACCATGTTGTTCGTGCAGAGATTTTACCGTCTTTGCTTCAATTCGGTGTGACTAAAGTAAGTGAGAGATTGAAAAGGTTTGTGAATGAACCAACCAGTGAAATTGAATTACAATCTGAATCAGTTGTTGGATTTTGA 603 0.403 MNQLGSRSQASPSSTNKKKIERRVIEKNRRNHMKMLYSKLNSLLPRPKEPLPLPDQVDKVINYIKSLEEKVKMAKEKRERSLGIGIRRKRTRGDCSGVDRQKPPQLEVHEIGSCVEIEMTCGLDTQFIFYEIIRILNEENIDVKSVNSSLIENSMYHVVRAEILPSLLQFGVTKVSERLKRFVNEPTSEIELQSESVVGF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1752 200 Coils Coil 57 77 - -
Ahy2g1752 200 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 13 190 - -
Ahy2g1752 200 MobiDBLite consensus disorder prediction 1 15 - -
Ahy2g1752 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 67 IPR011598 GO:0046983
Ahy2g1752 200 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 190 IPR015660 GO:0003700|GO:0006357
Ahy2g1752 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 78 IPR036638 GO:0046983
Ahy2g1752 200 Pfam Helix-loop-helix DNA-binding domain 19 68 IPR011598 GO:0046983
Ahy2g1752 200 MobiDBLite consensus disorder prediction 1 23 - -
Ahy2g1752 200 Gene3D - 8 91 IPR036638 GO:0046983
Ahy2g1752 200 SMART finulus 23 73 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1752 Ahy-Chr2 89570564 89572199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1752 12 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 33.155 3.71e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy2g1752 HLH 1.30E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1752 - - gmx:100817883 216.853