Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1737 ATGAGAGGTAGCATTCCAACAAGTATTGCCAATTTAAGCAGCTTAATAAGTCTTTCTCTTGGTCAAAATCAATTTGTTGGATCATTACCAAATGGAATGGGGAAATTACAGAAACTACAAGGTCTCATGTTAAGTGATAACAAGTTGGAAGGTTTTGTTCCACATGAACTTTGTCAACTAAAAAGCTTGGATTCATTAGCATTAGATAGCAATAGGTTCTATGGCCCAATACCTTCTTGCTTAAGTAATCTTTCATCATTGAGACAGTTTTGGATTTTTTCAAATGTGTTAAACTCAACAATACCTTCAACTTTGGGGAGTTTATCAAATTTGTTATTATTAGACTTATCTTCAAATAACCTAAGTGGATCTCTTCCATTTAATATATCCAATCTAAATGCTATGACTTGGCTTTATCTATCAAGAAATCAATTATCAGGTAGCATTCCAAGCAGCCTTGGAAACATTGTCCATTTGGGTGATCTCTCCTTAGCACAAAATGAATTCGAAGGAGTTATTCCGGAATCTTTTGGTCGTTTGGCAAGTCTAGAACGTCTTGACTTGTCGAAAAACAACTTGTCCGGTGTTATTCCTAAGTCATTGGAGTCACTTTTGTATTTGAACTACTTCAATGTTTCTTACAATAAGTTGGAAGGAGAAATTCCTCATGGTGGACCATTTGCTAATTTCTCTGTTCAATCATTCATTATGAACAGAGGACTCTGTGGCGCTTCCCGCTTGCAATTCCCAGAATGTGAAACAACGGGTAGATCTCGAAAAACAACTGCCTACATTTTCTTGAAATATATTTTACCAATAAGTAGTGTGGCCACTCTCCTTGTATTGGCATTCCTAAGCATCTTAAAGTTCCAAAATCATAATAAGGTGCTTCAAAATTTTGAAGTGGATCAAGCAATGGCAAGATGGAGAAGAATTTCATATTATGAAATTCAACAAGCAACAGATAGGTTTAATGGTGACAACTTACTTGGTATAGGGAGCTTCGGAAAAGTTTACAAAGGCGTCCTCTCGGACGGGACGAATGTTGCAATAAAGGTTTTCAATTTGGGGCTAGAAGGAGCATTTAGGAGTTTTGATCTTGAATGTGAAGTATTGCGCAATATTCGCCATCGAAACTTGACCAAAATCATAAGCAGTTGTAGTAACTTGGATTTCAAGGCATTGGTTATGAGCTACATGGTCAATGGGAGTTTGGAGAAGTGGTTACATTCAGAAGACCATAGTTTGAGTATGATAGAGAGGATTAACATAGTGATAGATATTGCAGAAGCAATTAATTATCTTCACCATGGTGGTTCTATATCAATTGTGCATTGTGATTTAAAACCAAGCAATATATTGCTAGATGAAGACATGGTTGCTCATGTCACAGATTTTGGCATTGCAAAGCTGCTAAATGGTGGAAATTCCATGACACATACATTGACTCTAGCCACAATAGGGTATATGGCTCCAGGTGATGTTTAA 1488 0.3663 MRGSIPTSIANLSSLISLSLGQNQFVGSLPNGMGKLQKLQGLMLSDNKLEGFVPHELCQLKSLDSLALDSNRFYGPIPSCLSNLSSLRQFWIFSNVLNSTIPSTLGSLSNLLLLDLSSNNLSGSLPFNISNLNAMTWLYLSRNQLSGSIPSSLGNIVHLGDLSLAQNEFEGVIPESFGRLASLERLDLSKNNLSGVIPKSLESLLYLNYFNVSYNKLEGEIPHGGPFANFSVQSFIMNRGLCGASRLQFPECETTGRSRKTTAYIFLKYILPISSVATLLVLAFLSILKFQNHNKVLQNFEVDQAMARWRRISYYEIQQATDRFNGDNLLGIGSFGKVYKGVLSDGTNVAIKVFNLGLEGAFRSFDLECEVLRNIRHRNLTKIISSCSNLDFKALVMSYMVNGSLEKWLHSEDHSLSMIERINIVIDIAEAINYLHHGGSISIVHCDLKPSNILLDEDMVAHVTDFGIAKLLNGGNSMTHTLTLATIGYMAPGDV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1737 495 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 492 - -
Ahy2g1737 495 SMART serkin_6 324 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1737 495 PRINTS Leucine-rich repeat signature 111 124 - -
Ahy2g1737 495 PRINTS Leucine-rich repeat signature 180 193 - -
Ahy2g1737 495 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 5 492 - -
Ahy2g1737 495 Gene3D Ribonuclease Inhibitor 1 255 IPR032675 -
Ahy2g1737 495 SUPERFAMILY L domain-like 3 245 - -
Ahy2g1737 495 Gene3D Transferase(Phosphotransferase) domain 1 400 493 - -
Ahy2g1737 495 Pfam Protein kinase domain 327 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1737 495 SMART LRR_typ_2 36 60 IPR003591 -
Ahy2g1737 495 SMART LRR_typ_2 108 132 IPR003591 -
Ahy2g1737 495 SMART LRR_typ_2 12 35 IPR003591 -
Ahy2g1737 495 SMART LRR_typ_2 180 203 IPR003591 -
Ahy2g1737 495 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Ahy2g1737 495 ProSiteProfiles Protein kinase domain profile. 324 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1737 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Ahy2g1737 495 Gene3D Phosphorylase Kinase; domain 1 294 399 - -
Ahy2g1737 495 SUPERFAMILY Protein kinase-like (PK-like) 303 492 IPR011009 -
Ahy2g1737 495 Pfam Leucine rich repeat 14 73 IPR001611 GO:0005515
Ahy2g1737 495 Pfam Leucine rich repeat 159 217 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1737 Ahy-Chr2 89120387 89121874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1737 1 492 Receptor kinase-like Gene Family AT3G47570 40.270 4.09e-108 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy2g1737 Pkinase 8.60E-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1737 - K13420 ahf:114924790 935.636