Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1634 ATGTCAAGTATTCAAATGTCTCATGTGGATTTGGAACAAGGAAGAATCCTCCACCACCACCACCACCACCATAGCTCAGTGACTGGGAGTGACATTAGTCTATGCTTCTCTGATGCTGATGATGGAGGCTCATGCTACTCCCATTTCTACTCCACAAATGGTGGTGGATCCTACGATGAAGATTGCTGCTCCTATGGTGGAGCCTCAAATGTTGCAGATGGTGATGATGATGATTGTTCAGTTGAGATTGAAATTGAAAGTGGGGTACCTGAGATTAAGGTGCATTTGGCCACAAACAATAAAGTTGAGAGTAGGGATTGCAGGATTTGCCACCTTGGTTTGGAAGGTGATGATGGGAATAATGAATCTGGTGTTCCAATTGAATTGGGTTGTTCTTGTAAAGATGATCTTGCTGCTGCTCACAAGAATTGTGCAGAGGCTTGGTTCAAGATTAAGGGTAATAGGACCTGTGAAATTTGTCATACAATTGCACGGAATGTGTATTCAGCAAGTGAGGACACAACAGAGGCATTGAGTGACATTAACAACAATAATATTAGTGTCACTGTTGGTTCAGCAGCATCCACAACAATCTCAGCACCTTCATCATCATCATCAGAAACTAGAAGATTTTGGCATGGCCATCGTTTCCTCAATTTTCTCCTTGCTTGTATGGTCTTTGCATTTGTCATATCATGGCTTTTTCACTTCAATGTTCCCTCTTCTTAA 729 0.4198 MSSIQMSHVDLEQGRILHHHHHHHSSVTGSDISLCFSDADDGGSCYSHFYSTNGGGSYDEDCCSYGGASNVADGDDDDCSVEIEIESGVPEIKVHLATNNKVESRDCRICHLGLEGDDGNNESGVPIELGCSCKDDLAAAHKNCAEAWFKIKGNRTCEICHTIARNVYSASEDTTEALSDINNNNISVTVGSAASTTISAPSSSSSETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1634 242 PANTHER OS01G0850200 PROTEIN 5 241 - -
Ahy2g1634 242 PANTHER ZINC FINGER, RING-CH-TYPE 5 241 - -
Ahy2g1634 242 SMART ringv_2 106 161 IPR011016 GO:0008270
Ahy2g1634 242 CDD RING_CH-C4HC3_MARCH 107 161 - -
Ahy2g1634 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 171 IPR013083 -
Ahy2g1634 242 ProSiteProfiles Zinc finger RING-CH-type profile. 99 167 IPR011016 GO:0008270
Ahy2g1634 242 SUPERFAMILY RING/U-box 101 164 - -
Ahy2g1634 242 Pfam RING-variant domain 107 160 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1634 Ahy-Chr2 86346511 86351509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1634 79 242 C3H Transcription Factor Family AT5G05830 57.927 3.79e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1634 - - gmx:100813946 308.916