Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1571 ATGGATGGCCAAACTAAATCTTATACTTGTGTTTTTTGTAAGAGAGGATTCTCAAATGCACAAGCACTTGGAGGCCACATGAATATTCATAGAAGAGATAGAGCCAGGCTTAGGCAATCACTTGAAGAGAAAATGTTGCTTCAAATTGATGATGATCAACAAAAAAATAATAATACCAACCATAAGAAGCCATGGAATTTTCTAGAAATGGATGATGATGATGATGATTATGCAATAATCCAAAGGGGCAAAGGAACAATAATTGGTGGTACTTCAGAAATTCCTCATCAATTTCCTCTTCTTGTTGGGGTGCCACATAGTTATAATAATTATATGAATGAGATAAGGAAAGGTATTATTGAAGAAAAGAATATTGAAGTGGATCTTGAGCTTCGTCTAGGGTTTATTGAGCCAAAAGAAGCAACAACTTTGAGCACTAGGAAATTCTTTTAA 453 0.3444 MDGQTKSYTCVFCKRGFSNAQALGGHMNIHRRDRARLRQSLEEKMLLQIDDDQQKNNNTNHKKPWNFLEMDDDDDDYAIIQRGKGTIIGGTSEIPHQFPLLVGVPHSYNNYMNEIRKGIIEEKNIEVDLELRLGFIEPKEATTLSTRKFF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1571 150 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Ahy2g1571 150 Gene3D Classic Zinc Finger 1 66 - -
Ahy2g1571 150 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 5 144 - -
Ahy2g1571 150 SUPERFAMILY beta-beta-alpha zinc fingers 5 34 IPR036236 -
Ahy2g1571 150 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 35 IPR013087 -
Ahy2g1571 150 PANTHER OS07G0101800 PROTEIN 5 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1571 Ahy-Chr2 84017576 84018028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1571 4 43 C2H2 Transcription Factor Family AT3G09290 80.000 1.83e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy2g1571 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1571 - - adu:107475090 306.99