Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1567 ATGCACTTGAACAAGGAAAAATATGACAACACAGTTAAAGAATGCACAAAAGCATTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGTGAAATGATGAAAAGATGA 249 0.3775 MHLNKEKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLEPLAAEKREMMKR* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1567 82 ProSiteProfiles TPR repeat profile. 26 59 IPR019734 GO:0005515
Ahy2g1567 82 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 2 81 - -
Ahy2g1567 82 Pfam Tetratricopeptide repeat 27 59 IPR013105 -
Ahy2g1567 82 SMART tpr_5 26 59 IPR019734 GO:0005515
Ahy2g1567 82 SUPERFAMILY TPR-like 2 70 IPR011990 GO:0005515
Ahy2g1567 82 Gene3D Tetratricopeptide repeat domain 1 82 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1567 Ahy-Chr2 83832524 83833340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1567 8 69 Calmodulin-binding Proteins AT3G25230 41.935 3.07e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1567 K24926 - aip:110270710 154.451