Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1556 ATGGTAACAATCTTAGGTACTCATACAGTGATCCCAAAAGAAGAAACTCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTTTGGCGATGGAGTCATACACCTTCAATCTACGTTTACAACCCAAAACAGAACAACAACACTGTCGTCGATGTCAATGTCCTCGTTGAGCGAATGCGAGATTCTCTCAGCGAGATTCTCGTTCACTACTATCCATTAGCCGGGAGGCTGAGTTGGACGGACGGTGGCCGTTTGGAACTCGATTGCAACGCAAAGGGGGTATTGCTTCTCGAAGCTGAATCGAAGAAATCAATGGCGGAATATGGAGACTTCACTCCAAATGAACCCAGCATCAAAGAACTCATCCCAGCTGTTGACTACTCTCGTCAAATAAACGAGCTTCCTTTGTTCTTGGCACAGGTGACAAAGTTCCACGGCGGCGATGGCGGCTTTGCAGTCGGAATCCTTTTTTCTCATCCATTAGGCGACGGCCTGGCCGCCATTCGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGTGCGAAGCTAGATCCAAGCGAGCTTCCGTTTCTCGACCGAACCGTGCTCAAACCAACCGGGCCATTAACTCAACCCCGGTTCGACCACCCGGAGTTCAAGCCTCTGCCGCTCATCCTCGGAAGAACCGACAACATCGAAGAGCAAAAGAAGAAGACGACCTTCGCGCTGTTAAAACTCACACCAGAACACGTCCAGAAGCTCAAAAAGAATGCAAATGCAAATGTAACCGCAAACGGAAACGGTAACGCTCCTCATAACCCATCTCCGAGACCGTACAGCAGATTCGAAATTATCAGCGCACATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTGAAGAGAATCAACCAACGGTCGTTAAATTCAACGTCGATATTCGCAACAGATTGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACCCCAACTTGCTACGCTAAAGAAATCACCACTCAACCAATCAGTTACGCATCGCAGAAAATAAGGGAAGCTGTTAATAAAGTGTCGAATCACGAGTTTGTTAAATCCCAAATGCATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGAACACCTTATTTGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAACATTATACTTGGCAGTTGGATGAGCATGCCGTTTTATGAGGCTGATTTTGGGTTGGGGAAGCCGTTTTATTTTGGTCCTGGTGGTGTGTGTCCTTATGACAGAGGGGTTATTGCTCTAATGCCTGACGAAGATGGTGATAATGGATATGGTGTTGTGGTGTACATGCACTTTCAGGTAGACCACATGAAAGATTTTATCAAATACTTTTGGGAAGATATTTGA 1422 0.4662 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYVYNPKQNNNTVVDVNVLVERMRDSLSEILVHYYPLAGRLSWTDGGRLELDCNAKGVLLLEAESKKSMAEYGDFTPNEPSIKELIPAVDYSRQINELPLFLAQVTKFHGGDGGFAVGILFSHPLGDGLAAIRFINSWAKLTRGAKLDPSELPFLDRTVLKPTGPLTQPRFDHPEFKPLPLILGRTDNIEEQKKKTTFALLKLTPEHVQKLKKNANANVTANGNGNAPHNPSPRPYSRFEIISAHIWRCACKARNLEENQPTVVKFNVDIRNRLNPPLPQNYFGNALGPTVTPTCYAKEITTQPISYASQKIREAVNKVSNHEFVKSQMHYVAGFENRWDLIRTPYLEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPGGVCPYDRGVIALMPDEDGDNGYGVVVYMHFQVDHMKDFIKYFWEDI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1556 473 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 473 - -
Ahy2g1556 473 Pfam Transferase family 1 467 - -
Ahy2g1556 473 Gene3D - 1 215 IPR023213 -
Ahy2g1556 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 473 - -
Ahy2g1556 473 Gene3D - 222 472 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1556 Ahy-Chr2 83444863 83446757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1556 2 471 Monolignol Biosynthesis Gene Families AT5G48930 34.681 7.57e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1556 K13065 - gmx:100779814 501.13