Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1516 ATGAAGGAGCGGCAACGTTGGAGAGCTGAAGAAGATGCTTTGTTACGAGCTTATGTCAAACAGTATGGTCCAAGGGAATGGAATCTTGTGTCGCAGCGCATGAACACGCCTCTTAACCGGGATGCGAAGTCATGCTTAGAAAGGTGGAAGAATTACCTTAAGCCAGGCATTAAGAAAGGATCTCTCACTGAAGAAGAGCAGCGTCTTGTGATCCGCCTCCAAGCGAAATACGGAAACAAATGGAAGAAAATTGCGGCCGAAGTCCCCGGTCGGACTGCTAAGAGATTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAACAGCTAAGACAGAAAAAGGAGATTAACAGAATTACCGAACCAATTAACGATAGCAAGTACGAGCACATACTAGAGAGTTTCGCCGAGAAGCTAGTTAAGGACAGCCCTTCGCCTTCGTTTGTTATGGCTTCTTCCAACGGGCCATTTCTTCATGCCGATGCACCGGCCCCTGCATCCCCTGTGCTTCCTTCTTGGCTTTCCAATTCTCATAGTCATAGTGCTACAACCGGCCCTCCGAATTCACCATCCGTGACACTAAGTCTTTCCTCACCAACCGTGGCAGCACCACCATTTCCGTGGATGCAACCGGAGCGAGCACCGGATAATGCTTCTTTTGCTTTAGGCAATGTGCCTCTTTGTGGACCTTTTCCGGCTTCTGGTGATAACATGCTGATATCTGAGTTGGTGGAGTGCTGCAAAGAGCTGGAAGAAACACATCATGCTTTGGCCGCGCATAAGAAAGAGGCAGCCTGGAGGTTAAGAAGGGTGGAGTTGCAGTTGGAGTCGGAGAAGGCAAGTCGAAGGAGGGAGAAGATGGAAGAAATCGAAGCGAAGATTAAAGCCCTCGAGGAAGAGCAGAAGGCTGCTTTGAGTAGAATTGAAGCTGAGTACAGGGAACAGTTAGCCGGATTAAGGAGGGATGCCGAGACCAAGGAGCAGAAGTTGGCCGAACAATGGGCGGCGAAGCACTTGCGGCTTACTCGGTTTCTGGAACAAGCAGGATGCAAACTGGGGCTCCCTGAGCAACATGGAAGATGA 1077 0.4977 MKERQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLRQKKEINRITEPINDSKYEHILESFAEKLVKDSPSPSFVMASSNGPFLHADAPAPASPVLPSWLSNSHSHSATTGPPNSPSVTLSLSSPTVAAPPFPWMQPERAPDNASFALGNVPLCGPFPASGDNMLISELVECCKELEETHHALAAHKKEAAWRLRRVELQLESEKASRRREKMEEIEAKIKALEEEQKAALSRIEAEYREQLAGLRRDAETKEQKLAEQWAAKHLRLTRFLEQAGCKLGLPEQHGR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1516 358 Pfam Myb-like DNA-binding domain 7 67 - -
Ahy2g1516 358 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Ahy2g1516 358 Gene3D - 62 125 - -
Ahy2g1516 358 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Ahy2g1516 358 CDD SANT 6 53 IPR001005 -
Ahy2g1516 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Ahy2g1516 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Ahy2g1516 358 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Ahy2g1516 358 MobiDBLite consensus disorder prediction 175 194 - -
Ahy2g1516 358 CDD SANT 63 104 IPR001005 -
Ahy2g1516 358 PANTHER TRANSCRIPTION FACTOR AS1 1 358 IPR031055 GO:0005634|GO:0006351|GO:0010338
Ahy2g1516 358 Coils Coil 266 327 - -
Ahy2g1516 358 SMART sant 58 106 IPR001005 -
Ahy2g1516 358 SMART sant 3 55 IPR001005 -
Ahy2g1516 358 Gene3D - 4 58 - -
Ahy2g1516 358 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1516 Ahy-Chr2 80763763 80766688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1516 1 353 MYB Transcription Factor Family AT2G37630 65.860 3.53e-158 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy2g1516 Myb_DNA-bind_6 6.20E-14 CL0123