Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1515 ATGGATGAGTTGAAATCAGAGGAAGGTTGTATAGAGAATAAGCAATCAACAGCTGCTTCTAGCTCCTTTGTATCAGAAGGCAGTGGCAGTTCTATACCAAAGTCCCCGGGGATAGGTAGCCAGGCATCGGCTTCACCCCCTCATCGAAGAACCACTGGTCCTATAAGGCGAGCAAAGGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGGAATGCTGTTGCAGCCTTTAAGGGAAAGAGTTGGAAAAAAATAGCTGAGTTTTTCCCTGATAGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACTAAGGAGGAGGATGACAAAATAGTTGAAATGGTGTCAAAATATGGGCCATCGAAATGGTCTTTGATAGCAAAGTCCTTGCCTGGTCGAATAGGAAAACAGTGTCGAGAACGGTGGCACAATCATCTTAATCCCGACATAAAGAAGGATGCTTGGTCTTCGGAAGAGGAGTTGGCCCTCATGAATGCTCATCGCATATATGGAAACAAATGGGCTGAAATTGCTAAGGTTCTTCCTGGAAGGACTGATAATGCTATAAAGAACCACTGGAATAGTTCGCTAAAAAAGAAGATGGATTTCTATTTAGCCACGGGAAGACTTCCACCAACTTTGAAGAACAGTCCACAAGTTGTTGTTAAAGACACTGTTAGACATTCTAAACCTACATTATTTGTTTGTTCAAATAAAGAATCAGATACTGCAGTTGAATCTTCATCGGAAACTACAGAAATTACTCAACTAGATAGCAGTGACCAGAATGACAAGAATCGACTAGAGTGCTTTGTAGCAGTTGGAGATTCCTCTGGTGCTCCTCTTGTAAATGAATCTGTTGATACTGAATGCAAAGCTGGATCATCCAACATAAATATCAGCTGCAACAAATCAGAACTGGTGTCAAGCGGTACTTTCCAAGTACATAGTGCGAAGAACTCCGAGAATCCTGGACTGAGTGGCAAACCGAGTGAGAGTTGCAGAGACAATGCTAAGATGAGCAATAACAGATTCTGTAGAACATGTTTTTCACACGAAACTCCGGTCTCTGGTTCTTTATGCTACGAGCCACCACAGTTAGACATTTCAGTCCCTTTAGATTCTCTTTATTCCAATATCCTTCATGAGCAGAATGACTGCTCTTCTCCGATTGCGTCATCCGTTGGTTTCTTCTCTCCACTTGGTGTAAATGGTAGTGAAAACGTAACCCCTGAATCAATATTGAAAATGGCAGCAAAAACTTTTCCGAGTACTCCTTCAATAATGAGGAAGAGAAGGACTGTTTCCCAAGCACATGTCACTCCTAGTAAAGCTTTGAAAGCAGATATTGATTCACAGACGTCTAAAGTACAAGAGAGATCCAAGGATAATTCTGATTCTATAGTTGGGAGCGACATTAATAATAATAAGGATTTCAATGCATCTCCCCCCTATCGACTTAGACCAAAGCGGACCGCAGTTGTCAAGTCTATTGAGAAACAGCTTGAGTTTGCATTTGAAAAGGAGAAGGATGACAGTGGTATGCATAAAGTACAAGGAGGTGCTTTGTCATGA 1608 0.4179 MDELKSEEGCIENKQSTAASSSFVSEGSGSSIPKSPGIGSQASASPPHRRTTGPIRRAKGGWTAEEDETLRNAVAAFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTKEEDDKIVEMVSKYGPSKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWSSEEELALMNAHRIYGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKMDFYLATGRLPPTLKNSPQVVVKDTVRHSKPTLFVCSNKESDTAVESSSETTEITQLDSSDQNDKNRLECFVAVGDSSGAPLVNESVDTECKAGSSNINISCNKSELVSSGTFQVHSAKNSENPGLSGKPSESCRDNAKMSNNRFCRTCFSHETPVSGSLCYEPPQLDISVPLDSLYSNILHEQNDCSSPIASSVGFFSPLGVNGSENVTPESILKMAAKTFPSTPSIMRKRRTVSQAHVTPSKALKADIDSQTSKVQERSKDNSDSIVGSDINNNKDFNASPPYRLRPKRTAVVKSIEKQLEFAFEKEKDDSGMHKVQGGALS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1515 535 Gene3D - 111 162 - -
Ahy2g1515 535 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Ahy2g1515 535 Gene3D - 58 110 - -
Ahy2g1515 535 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Ahy2g1515 535 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Ahy2g1515 535 PANTHER MYB-RELATED PROTEIN B-LIKE 18 471 - -
Ahy2g1515 535 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Ahy2g1515 535 MobiDBLite consensus disorder prediction 478 492 - -
Ahy2g1515 535 CDD SANT 113 157 IPR001005 -
Ahy2g1515 535 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Ahy2g1515 535 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Ahy2g1515 535 PANTHER MYB PROTEIN-RELATED 18 471 - -
Ahy2g1515 535 Pfam Myb-like DNA-binding domain 114 172 - -
Ahy2g1515 535 Gene3D - 164 231 - -
Ahy2g1515 535 MobiDBLite consensus disorder prediction 449 463 - -
Ahy2g1515 535 SMART sant 162 210 IPR001005 -
Ahy2g1515 535 SMART sant 110 159 IPR001005 -
Ahy2g1515 535 SMART sant 58 107 IPR001005 -
Ahy2g1515 535 MobiDBLite consensus disorder prediction 1 64 - -
Ahy2g1515 535 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Ahy2g1515 535 MobiDBLite consensus disorder prediction 11 48 - -
Ahy2g1515 535 CDD SANT 62 105 IPR001005 -
Ahy2g1515 535 MobiDBLite consensus disorder prediction 449 496 - -
Ahy2g1515 535 CDD SANT 165 208 IPR001005 -
Ahy2g1515 535 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Ahy2g1515 535 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1515 Ahy-Chr2 80678483 80684032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1515 3 523 MYB Transcription Factor Family AT3G09370 50.093 1.17e-149 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy2g1515 Myb_DNA-bind_6 6.80E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1515 K09422 - gmx:778081 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1773 12 95713287 95718765 Ahy2g1515 2 80678483 80684032 hybridization